Pairwise Alignments

Query, 306 a.a., Transcriptional Regulator, LysR family (NCBI) from Rhodospirillum rubrum S1H

Subject, 304 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  273 bits (699), Expect = 3e-78
 Identities = 142/301 (47%), Positives = 195/301 (64%), Gaps = 3/301 (0%)

Query: 1   MDRLTLMETFTKVAELGSFSRAAERLGLSRSVVSKYVSALEDRLGARLVNRTTRRLSLTE 60
           +DR+  M+ FT V + GSF++AA+RLGLS  +VSKYVS LE+ L  RL+NRTTRR+++TE
Sbjct: 3   LDRIDTMKAFTAVVQEGSFTKAADRLGLSSQLVSKYVSQLEEHLKVRLLNRTTRRVNVTE 62

Query: 61  VGEVYLLRCQAILADLEEAEQAAGALHGAARGTLRINAPMSFGFRHLAAAIPPFLAHHPG 120
            G  Y  RCQ +L D+EE + A   L   A G L+++APMSFG  HL +A+  F   HP 
Sbjct: 63  AGRAYFERCQQVLIDIEEMDNALTNLSETASGLLKVSAPMSFGIHHLPSALVQFQQQHPD 122

Query: 121 LGVDMTLDDRFVDLLDAGFDVAVRIGSLPDSSLIAVRLAPLHIVVCASPEYIKAQGAPER 180
           + +D+TL D+ VDLL+ G DVA+RIG L  SSLIA +L P+ +VVCASPEY+  +G P+ 
Sbjct: 123 VRLDITLTDKKVDLLEDGVDVALRIGQLTSSSLIAKKLTPIKLVVCASPEYLAERGEPKT 182

Query: 181 PEDLTGHNCLIYSLQRFGDLYPLVHAGGGEQVSVPVHGRFRANNGDALRAAAVAGGGVMI 240
           P DL  HN L +S   + DL       G    ++ +      NNGD L  AA+AG G+++
Sbjct: 183 PADLIHHNYLHFS---YSDLGAAFGRFGEHFSALKIPSDLACNNGDMLVEAAIAGRGIVV 239

Query: 241 SPTFLCGDDLRAGRLVRLLPEWTGPEQGINAVYPHNRHVSAKVRAFVDHLKGWCGKLPYW 300
            PTFL    LR+G+L  +L ++T    G+ AVY H + +++KVR FVD L  + GK PYW
Sbjct: 240 QPTFLVSKALRSGKLKAILTDYTPEPFGLYAVYVHRKFLASKVRCFVDALSQYYGKTPYW 299

Query: 301 D 301
           D
Sbjct: 300 D 300