Pairwise Alignments

Query, 510 a.a., Nitrogenase molybdenum-iron protein beta chain (NCBI) from Rhodospirillum rubrum S1H

Subject, 462 a.a., nitrogenase molybdenum-iron protein subunit beta from Methanococcus maripaludis S2

 Score =  287 bits (735), Expect = 5e-82
 Identities = 166/450 (36%), Positives = 250/450 (55%), Gaps = 22/450 (4%)

Query: 63  VINPNKACQPLGALFAAAGFDGTLGYVHGSQGCAAYFRSHLSRHFKEASSVVSDSMTEDA 122
           VINP   CQPLGA++A +G +  +  VHGSQGC+ + R   +RHF+E + +   S+ EDA
Sbjct: 14  VINPIVTCQPLGAMYAVSGIERGMPLVHGSQGCSTFVRYGFARHFREPADIAVTSLHEDA 73

Query: 123 AVFGGLNNMVDGLANAYALYKPKMIAVCTSCMAEVIGDDISSFIGNAKTK------ESIP 176
           AVFGG  N++ GL N  A +KP ++ V T+C +E+IGDD++ FI  AK +      E   
Sbjct: 74  AVFGGRKNLISGLGNLAARFKPDVMGVVTTCSSEIIGDDVAGFIKTAKVEIAKKMGEEAA 133

Query: 177 ADFPVPFAHTPSFVGSHIVGYDNMMKGILTTFWDGKVRDAATDKINIIPGFDGYSVGNIR 236
               +   +TPSFV     GYDN +K I+ T  + K  D    K+NIIPG    + G+IR
Sbjct: 134 NKIKIVQINTPSFVEHQFKGYDNAIKAIVDTLAEPK--DEENGKLNIIPGI--VNPGDIR 189

Query: 237 ELKRILGMIGVEYTVLSDTSDVYDTP-----TDGEFRMYDGGTTQDDTIAALQAKATLSL 291
           E+K +L ++GVE  +L+DTSD +D+P      D       GGT   D      +  T+SL
Sbjct: 190 EIKHMLSLMGVEGILLTDTSDPFDSPLRPSKADKNPYYQKGGTPLADLQDCANSLGTISL 249

Query: 292 SEYCTPATLKFIAETGQETAAFNYPMGVGATDDFLVKLVALTGKDIPEALTKERGRLVDA 351
           + Y   A      +    +     P+G+  TD F+  +   TG D+ + +  ERG ++DA
Sbjct: 250 ANYANSAPASLEKKYNMPSKVSEAPIGIQNTDSFIRTVKKFTGNDVTDEILDERGIVIDA 309

Query: 352 LAD-SMTWLHGKKMAVYGDPDFTLSMVRFLLEMGVEPVHVLATNGTKKWEKQVKALLATS 410
           +AD +  +L G+K+A+YGDP  T+ M RF+ E+G+ P  V      + +   +K +   S
Sbjct: 310 MADVASRYLFGRKVAIYGDPSITVGMARFVAELGMIPKVVCTGVKNEYFVNDLKKVAKES 369

Query: 411 PFGKDAQVWQGKDLWHLRSLLATEPADFLIGNSYGKYLELDLGIPLIRLTFPIFDRHHHH 470
              +D     G+DL  L   L   P D +IG+S G+ +  DLGIPL R+ +P++DR  + 
Sbjct: 370 --DEDIDALFGQDLRALDVYLKENPVDLMIGSSDGRLMAKDLGIPLYRVGYPVYDRVGYQ 427

Query: 471 RFPTMFYDGSLR----VLTTILDKVFDTLD 496
           R P + Y+G+L     +  TILDK ++T D
Sbjct: 428 RRPIIGYNGALNLVDGITNTILDKYYETQD 457