Pairwise Alignments

Query, 487 a.a., Nitrogenase molybdenum-iron protein alpha chain (NCBI) from Rhodospirillum rubrum S1H

Subject, 480 a.a., nitrogenase iron-molybdenum cofactor biosynthesis protein NifE from Methanococcus maripaludis S2

 Score =  309 bits (792), Expect = 1e-88
 Identities = 174/472 (36%), Positives = 274/472 (58%), Gaps = 15/472 (3%)

Query: 7   NDAELSQKAIEEVLEAYPE-KAAKKRKKHLGTIVAEGEGSSCGVKSNVKAIPGVMTIRGC 65
           +D +L  K    + E     +A K R+  +     +    +C   S     PG++T R C
Sbjct: 19  DDFDLEVKIPNSIFEKLKSIEALKARESQMCVSGKDDSIPTCDKNST----PGMITQRSC 74

Query: 66  AYAGSKGVVWGPVKDMVHISHGPVGCGQYSWSQRRNYFTGQVGVDSFVTMQFTSDFQEKD 125
            Y G++ VV  P+ D VH+ HGP+GC   +W  R +  TG    D      F++D QEKD
Sbjct: 75  VYGGAR-VVLMPITDAVHLVHGPIGCAACTWDIRGSKSTG----DKLYKNGFSTDLQEKD 129

Query: 126 IVFGGDKKLEKVIDEIKGLFPLVRGISIQSECPIGLIGDDIEAVARKKAKDVGLPIIPVR 185
           IVFGG+KKL + I E+  L+     I + S C +GLIGDD++AV R+  +  G  +IPV+
Sbjct: 130 IVFGGEKKLYESILEVNKLYH-PGAIFVYSTCVVGLIGDDLKAVCRQAQEATGCRVIPVQ 188

Query: 186 CEGFRGVSQSLGHHIANDAIRDWVFSRDSESAFETTPYDVNIIGDYNIGGDAWASRILLE 245
            EGF+  +++ GH +A DA+ D+V    +E   E  PY +NIIG++N+ GD W    L E
Sbjct: 189 SEGFKSFNKTAGHKLACDAMLDYVIG--TEEPEEEHPYSINIIGEFNVAGDLWGIIPLYE 246

Query: 246 EMGLRVIAQWSGDATIAEMERAPKAKLNLIHCYRSMNYICRHMEEKHGVPWMEYNFFGPS 305
           +MG++V    +GD+T+A++  A ++KLN++ C +S NY+   ME+K+G+P ++ NFFG  
Sbjct: 247 KMGVKVHTAITGDSTVAKVASAHRSKLNIVQCQKSSNYLAAQMEKKYGIPSIKVNFFGLD 306

Query: 306 QIEKSLRAIAANF-DETIQKKAEEVIAAHRPTVDAVINKYKARLEGKRVMLYVGGLRPRH 364
           +  KSLRA+A  F DE + K+ EE+I +    +   I++YK  L G+ V +Y G  +   
Sbjct: 307 ETTKSLRAVAEFFGDEEMIKRTEELIKSEIKNLRDEISEYKKDLSGRTVAIYSGAHKSWA 366

Query: 365 VMTAYEDLGMQICGAGYEFAHSDDYQRTTEYAKEGTLIYDDLTGYELERFIEKLRPDLVG 424
           +++A+ +L M+I  +G +    +DYQ+  ++  EGTLI DD +  EL + +++ +PD++ 
Sbjct: 367 LVSAFGELDMEIIMSGTQNGKPEDYQQIRDHVCEGTLIVDDASSMELVQLLKEYKPDILI 426

Query: 425 SGIKEKYAVQKMGVPFRQMHSWDYSGPYHGYDGFAIFARDMDMAINNPVWAL 476
           SG KEKY   K G+P    +  D    + GY GF  FAR +  A+  P+W L
Sbjct: 427 SGAKEKYLSLKSGIPHCDFNH-DRITAFSGYQGFINFARVVHTAVMTPIWRL 477