Pairwise Alignments

Query, 340 a.a., Lysine-arginine-ornithine-binding periplasmic protein (NCBI) from Rhodospirillum rubrum S1H

Subject, 341 a.a., ABC transporter for L-Glutamine, L-Histidine, and other L-amino acids, periplasmic substrate-binding component (from data) from Sinorhizobium meliloti 1021

 Score =  431 bits (1108), Expect = e-125
 Identities = 209/334 (62%), Positives = 257/334 (76%), Gaps = 2/334 (0%)

Query: 9   AAFGAAGVIASGSAMAASTLDTVKSRGEVTCGVNNGLPGFALPDDKGHWTGIDVDICRAV 68
           A  GAA V     A +A+TLD VK++G V CGVN GL GFA PD  G+W+G DVD C+A+
Sbjct: 8   ALVGAAVVGIGTHAASAATLDDVKAKGFVQCGVNTGLAGFAAPDASGNWSGFDVDYCKAI 67

Query: 69  AAAVFGDAKKVKFVPLNAKERFTALQSGEIDVLSRNTTWTQTRDASLGLIFAGVNYYDGQ 128
           AAA+FGD  KVK+ PL+AKERF ALQSGE+DVL+RNTTW+  RD +LG  F  VNYYDGQ
Sbjct: 68  AAAIFGDGSKVKYTPLSAKERFPALQSGEVDVLARNTTWSINRDTALGFNFRPVNYYDGQ 127

Query: 129 GFMVKKELGVSSAKELNGASICIQSGTTTELNLADYFRANAMTYSPVVFDTSDQTVQGFA 188
           GFMV+KEL V SA EL+GA++C+Q+GTTTELNLADYF+AN + Y+PVVF+  ++    + 
Sbjct: 128 GFMVRKELDVKSALELSGAAVCVQTGTTTELNLADYFKANNLQYNPVVFEKLEEVNAAYD 187

Query: 189 GGRCDVLTSDQSQLYALRIKLEDPKSAIVLPEVISKEPLGPMVRQGDDQWLNIVRWSLFA 248
            GRCDV T+DQS LY+LR+ L  P   IVLPE+ISKEPL P VRQGDDQW +IV W  +A
Sbjct: 188 AGRCDVYTTDQSGLYSLRLTLSKPDDHIVLPEIISKEPLAPAVRQGDDQWFDIVSWVHYA 247

Query: 249 QLNAEELGVTSANADEVKAGTDQNVKRLLGTEGE--MGKQLGLGNDWAYAIVKQVGNYGE 306
            + AEE GVT AN +E+K  T+ +V+R LG E +  +G  LGL N+WA  IVK VGNYGE
Sbjct: 248 LVQAEEFGVTQANLEEMKKSTNPDVQRFLGVEADSKIGTDLGLTNEWAVNIVKAVGNYGE 307

Query: 307 MFERNIGKGSPLEIERGLNALWNKGGIQYAPPIR 340
           +F+RNIG GSPL+IERGLNALWNKGG+QYAPP+R
Sbjct: 308 VFDRNIGAGSPLKIERGLNALWNKGGLQYAPPVR 341