Pairwise Alignments

Query, 493 a.a., UDP-N-acetylmuramyl-tripeptide synthetase (NCBI) from Rhodospirillum rubrum S1H

Subject, 444 a.a., UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase from Vibrio cholerae E7946 ATCC 55056

 Score = 70.9 bits (172), Expect = 9e-17
 Identities = 74/249 (29%), Positives = 108/249 (43%), Gaps = 45/249 (18%)

Query: 104 FAGAQPATVVAVTGTNGKTSSVSFTRQIWDRLGRTAASLGTLGAESGVYRRAGSMTTPDP 163
           FA      V+A+TG+NGK++    +  + +  G  AA  G +G        A  + +PD 
Sbjct: 106 FAWHVDTPVIAITGSNGKSTVTDLSGVLANAAGVKAAVGGNIGVP------ALDLISPD- 158

Query: 164 VSLHKMLAEMTEAGVDALAMEASSHGLDQYRLDGVRLSAAAFTNLTRDHLDYHHTMDAYL 223
                         V+   +E SS  L+      ++L AAAF NL+ DH+D +  M+ Y 
Sbjct: 159 --------------VELYVLELSSFQLET--TSSLKLKAAAFLNLSEDHMDRYQGMEDYR 202

Query: 224 AAKARLFGEVLGREGVAVLNADD-PAFPTLAALCRDRGQSVLDYG-RSAKTLRLAGVSAK 281
            AK R+F         AV+NADD   FP  AA  +     V+ +G   A    LA    +
Sbjct: 203 QAKLRIFDHA----ETAVVNADDTQTFPDHAAHLQ-----VVTFGVEQAAQFSLAQHQGR 253

Query: 282 AHGQSLDLELFGRHHSVL----LPLVGDFQAMNVLCALGLAIATGAPVDAAVATLASLEG 337
            +       LF R  +V+    L LVG     NVL  L L  + G     A+  L S  G
Sbjct: 254 EY-------LFARDEAVMACAELSLVGRHNVANVLTVLALLDSAGVNFRLALDALKSYTG 306

Query: 338 VPGRLEMVA 346
           +  R ++VA
Sbjct: 307 LTHRCQVVA 315