Pairwise Alignments

Query, 577 a.a., DNA repair protein RecN (NCBI) from Rhodospirillum rubrum S1H

Subject, 554 a.a., DNA repair protein RecN from Vibrio cholerae E7946 ATCC 55056

 Score =  296 bits (759), Expect = 1e-84
 Identities = 199/561 (35%), Positives = 300/561 (53%), Gaps = 12/561 (2%)

Query: 1   MLSALSIRDVVLIERLDLAFGPGLGVFTGETGAGKSILLDSLSLALGARADSALVRKGAP 60
           ML+ LSI +  +++ L L    G+   TGETGAGKSI +D+L L LG RA++++VR+G  
Sbjct: 1   MLAHLSINNFAIVKSLQLELSKGMTTITGETGAGKSIAIDALGLCLGGRAEASMVRQGED 60

Query: 61  QLSVSAEFTLAADHPARALLGAADLGVDGSEPVVVRRVVTADGRSRAYVNDQPTSVGLLR 120
           +  VSA F L  +  A   L   +L ++G E  ++RR++T DGRS+A++N  P  +  L+
Sbjct: 61  KTEVSAAFHLDNNLLASRWLEDNEL-LEGKE-CILRRIITKDGRSKAFINGSPVPLSQLK 118

Query: 121 QLGQSMVEIHGQFESHGLLDPASHRGVLDGFAGADSGQPAGLLPAVEAAHATWKAAVTAR 180
            LGQ ++ +HGQ     L+ P     +LD +AG      A LL A   A+  W+ A    
Sbjct: 119 TLGQLLINVHGQHAHQQLMKPEYQLSMLDQYAGH-----ADLLKATRHAYQNWRQASNQL 173

Query: 181 RRAEADLARARAEEDLLRHTGTELEALAARPGEEEALAEERALLMNGEKLAEGLNGALGA 240
           ++   +  + +A+  LL +   EL  LA    E   L +E+  L N   LA     A+  
Sbjct: 174 KQLRENSQQNQAQLQLLEYQIKELNELALGEDEFVELEQEQKRLANSGDLALNCQRAIEL 233

Query: 241 LSQPLPVETA--LRHAMRALERVAPMAGHRLDGVIEGLERASVEAAEAQAQLQAVIGALD 298
           L++   V     L+     L  +A M   +L  +   +  A ++  E   +L+  + ++D
Sbjct: 234 LNEGEEVNALGLLQSVSHTLIDLAEMDS-KLTALPSMVAEALIQLEETYHELRNYLDSID 292

Query: 299 MDPRRLETVEERLFALRGLARKHGLTVDGLPALLEDIRRQIATLEGDEDLLGGLRKAEEN 358
           +DP R+  VEER   +  LARKH +  + L    + + +QIA L+  ++ +  L    + 
Sbjct: 293 VDPERMAYVEERYSKVMSLARKHHVLPEELYQHHQALLQQIAQLDCSDEKMSALASEVDV 352

Query: 359 ARATYVEAARALSRVRRQAAGALDRAVAAELPPLKLERARFVTTLEDLPEDQWGAAGLDR 418
              T+V AA  L + R + A  LD+ ++  +  L +E+A+F   ++          G D 
Sbjct: 353 LYQTFVAAADKLHKSRVRYAKELDKLISQSMHELSMEKAQFKIEVQQ-DSAHSSPLGFDA 411

Query: 419 VAFLVATNPGGDPGPIHKIASGGELARFMLALKVILAAGGDVPTLIFDEVDAGIGGATAA 478
           V FLV+TNPG    PI K+ASGGEL+R  LA++VI A   D P+LIFDEVD GI G TAA
Sbjct: 412 VTFLVSTNPGQPLQPIAKVASGGELSRMSLAIQVITAQKVDTPSLIFDEVDVGISGPTAA 471

Query: 479 AVGERLARLGQAVQVLVVTHSPQVAAMGQRHYRVLKSDDGKGGFGTGVDALSPAERIEEV 538
            VG+ L +LG++ QVL VTH PQVA  G     V K     G   T +  L   +RI E+
Sbjct: 472 VVGKLLRKLGESTQVLCVTHLPQVAGCGHHQLFVAKQTKA-GKTETQMLKLDQEQRIAEL 530

Query: 539 ARMLAGAHITDQARAAARSLL 559
           AR+L G+ IT+   A A+ LL
Sbjct: 531 ARLLGGSQITESTLANAKELL 551