Pairwise Alignments

Query, 443 a.a., Histidine kinase (NCBI) from Rhodospirillum rubrum S1H

Subject, 569 a.a., signal transduction histidine kinase, LytS (RefSeq) from Shewanella amazonensis SB2B

 Score = 99.8 bits (247), Expect = 2e-25
 Identities = 63/198 (31%), Positives = 101/198 (51%), Gaps = 15/198 (7%)

Query: 193 RVELEKSL-REAELQALSYQVNPHFLFNVLNTIGRLALKEHAPKTEDMLYAFADMMRYVL 251
           RVE +K+L  + EL+ L  QVNPHFLFN LNTIG + ++        +L   +  +R  L
Sbjct: 355 RVEQQKNLLTQTELKLLQAQVNPHFLFNALNTIGAI-IRRDPDMARGLLQKLSQFLRINL 413

Query: 252 KKSRSQIVSLQTEVGHVRNYLHIQKVRMGDRFTFTMDVPAKYDGILCPFMVLHPIVENSI 311
           K+S  ++V+L  E+ H+  YL I+K R  DR +  + +P +      P   L PI+EN++
Sbjct: 414 KRS-PEMVTLADELEHIDAYLGIEKARFIDRLSVNIAIPPELMHQKLPAFTLQPIIENAV 472

Query: 312 NYAIEPHEADGRIEITARDDGLNMILRVVDNGDGVSPELVRAALDGVAEPHGRTSIGLHN 371
            +      + G I+++ R     ++L V DN     P                  +G++ 
Sbjct: 473 KHGTSQLLSPGVIDVSGRQQEQMLVLEVADNAGLYRP------------TPNNEGLGMNL 520

Query: 372 VDSRLRHFFGPDYGLTVE 389
           V  R+++ FG  YG+TVE
Sbjct: 521 VHKRIQNQFGEQYGVTVE 538