Pairwise Alignments

Query, 443 a.a., Histidine kinase (NCBI) from Rhodospirillum rubrum S1H

Subject, 603 a.a., signal transduction histidine kinase, LytS (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 96.7 bits (239), Expect = 2e-24
 Identities = 83/299 (27%), Positives = 129/299 (43%), Gaps = 52/299 (17%)

Query: 134 DAHLIALREKITEIPYVKL-----RSAAYTLYHLAAYLVEESYSNAVSQELSAKNLKLME 188
           DA ++ LR+    +  +KL     R    T + LA  L +   +    +E+  KN     
Sbjct: 311 DAIIVPLRKGGQILGCLKLYGTKNRPLDQTRFELAKGLADLFSTQIELEEIGIKN----- 365

Query: 189 ESKRRVELEKSLREAELQALSYQVNPHFLFNVLNTIGRLALKEHAP-KTEDMLYAFADMM 247
                    + +  AE++ L  Q+NPHFLFN LN +        AP +  D++   A  M
Sbjct: 366 ---------QLIARAEIRRLQAQINPHFLFNSLNAVASFC--RTAPGQARDLILDLARYM 414

Query: 248 RYVLKKSRSQIVSLQTEVGHVRNYLHIQKVRMGDRFTFTMDVPAKYDGILCPFMVLHPIV 307
           R  L  SR  I  L  E+  VR+YL I++ R GDR    +D+       L P +++ P+V
Sbjct: 415 RRNLDSSRGAI-RLSEELEQVRSYLVIEQARFGDRIRADIDLAPGTADWLIPPLLIQPLV 473

Query: 308 ENSINYAIEPHEADGRIEITARDDGLNMILRVVDNGDGVSPELVRAALDGVA---EPHG- 363
           ENS+ + I   E  G + ++A  DG ++++ V D+G G+  +   A L   A    PH  
Sbjct: 474 ENSVRHGILAREEGGLVRLSAHADGDHLLVTVEDDGAGMDDDTRNAILAPDASDLSPHMY 533

Query: 364 -------------------------RTSIGLHNVDSRLRHFFGPDYGLTVESPATPGGR 397
                                    R  IG  N + RL   +GP Y + ++S    G R
Sbjct: 534 VEARNEALYEAQPGQTCSDTMVESLRDGIGARNCNQRLMQMYGPSYAMRIDSEPGRGTR 592