Pairwise Alignments

Query, 1052 a.a., Hydrophobe/amphiphile efflux-1 HAE1 (NCBI) from Rhodospirillum rubrum S1H

Subject, 1058 a.a., multidrug-efflux system transmembrane protein from Sinorhizobium meliloti 1021

 Score = 1060 bits (2740), Expect = 0.0
 Identities = 551/1045 (52%), Positives = 730/1045 (69%), Gaps = 4/1045 (0%)

Query: 1    MSLSKFFIDRPIFAGVISTVILLAGLISMVLLPISEYPEVVPPSVIVKAQFPGANPKVIA 60
            M  + FF+DRPIFA V+S V+L+ G I+   LP+++YPE+ PP+++V+A +PGA+ + +A
Sbjct: 1    MRFAHFFVDRPIFASVLSIVLLIVGSIAYFQLPVAQYPEIAPPTIVVRASYPGADAETVA 60

Query: 61   QTVATPLEEQINGVEDMLYMSSQAASDGTMTLTISFKLGTDPDLATQLVQNRVNQALTRL 120
             TVATPLE++INGVE+MLYMSS A +DG+M LTI+FKLGTD D A  LVQNRV+ A  RL
Sbjct: 61   NTVATPLEQEINGVENMLYMSSYATADGSMALTITFKLGTDLDQAQVLVQNRVSIAEPRL 120

Query: 121  PEVTRQLGVTTVKSSPDLTMVVHLTSPNERYDMLYLRNYALLNVKDQLAKIQGIGSVQLF 180
            PE  R++GVTT KSSPDL MVVHL SPN+RYD LY+ NYA   ++D L ++ G+G V LF
Sbjct: 121  PEEVRRIGVTTTKSSPDLMMVVHLLSPNDRYDQLYVSNYARTRIRDILVRLDGVGDVLLF 180

Query: 181  GSGDYAMRIWLDPQKVAERGMTATEVIAAIRRQNVQVAAGVIGGPPYGTGVAVQVPVNAQ 240
            G  +YA+RIWLDPQK++  GMTA +V++A+R QNVQV+ G IGGPP  +  A Q  V   
Sbjct: 181  GEREYALRIWLDPQKLSAYGMTAGDVVSALREQNVQVSGGSIGGPPMSSDSAFQYTVTTD 240

Query: 241  GRLTDADEFREIIIKR-DGGVVTRLKDVARIDLDAAQYGLRSLLDNKPAVAIPVFQAPGS 299
            GR +DA +FR +I+K  + G + +L+DVARI+L A +Y   S L+  PAVA+ +F  PGS
Sbjct: 241  GRFSDARQFRYVIVKATEEGRLVQLQDVARIELGAREYVTNSYLNGSPAVALGIFSRPGS 300

Query: 300  NAIEISNQVRATMAELKKSFPEGLDYAIAYDPTVFVRGSIEAVVHTLLEAVALVVIVVIL 359
            NA+  ++ ++ATM EL + FPEGL+Y I Y+PT F+  SI+ V  T+ EA  LV +VVI+
Sbjct: 301  NALAAADAIQATMTELSRDFPEGLEYRIIYNPTEFISESIDEVYKTIAEAALLVALVVIV 360

Query: 360  FLQTWRASIIPLLAVPISIIGTFAVMHLFGFSINALSLFGLVLAIGIVVDDAIVVVENVE 419
            FLQ+WR +IIP++A+P+S++GTFA+++ FGFS+N L+LFGLVLAIGIVVDDAIVVVENVE
Sbjct: 361  FLQSWRTAIIPIVAIPVSLVGTFALLYAFGFSLNMLTLFGLVLAIGIVVDDAIVVVENVE 420

Query: 420  RNIENGLSPRDATLKAMREVTGPIIAIALVLCAVFVPIAFISGLTGQFYRQFALTIAFST 479
            RN+  G++PR+A    M EV   +IAI+LVL AVFVP AFI G+ GQFY QFA+TIA +T
Sbjct: 421  RNLARGMTPREAAHVTMDEVGAAVIAISLVLTAVFVPTAFIPGIAGQFYLQFAVTIAVAT 480

Query: 480  VISAFNSLTLSPALAVTLLRGEGAPKDALTRGMDRVLGPFFRGFNRVFHASSHGYGRGVG 539
            VISA NSLTLSPALA  LLR            + R+   F  GFNR F   + GY   V 
Sbjct: 481  VISAVNSLTLSPALAAILLRPHENHDHESRNPLTRLGRGFANGFNRGFDRMADGYAWTVR 540

Query: 540  GILGRKSL---AMLVYVGLLGATYLGFAQVPPGFVPSQDKQYLVGFAQLPEGATLDRTES 596
             ++  +     A+LV+V LLGAT+     VP GF+P+ D+ Y +   QLP+GA+L+RT+ 
Sbjct: 541  HLVRTRIALAGALLVFVALLGATWYMAQVVPRGFIPTMDQGYAIVVIQLPDGASLERTDK 600

Query: 597  VIRAMSDIALRDPGVESAIAFPGLSINGFINSPSAGVVFVTLKPFEQRESAELSGFAISQ 656
            V+R  S++    PGV+ A+AF G +   F N+ ++GV+F     FE+R   + S   I  
Sbjct: 601  VVRRASEMIREVPGVKDAVAFAGFNGATFTNASNSGVIFTPFDSFEERLEQKQSAEQIIG 660

Query: 657  RLQQRYAGVSEAFIAIFPPPPVQGLGTIGGFKLQVEDRTDQGYEALDQTMKAVLAKAATT 716
            ++     G+ EAFI   PPP V+G+G  GGFK+Q+ DR              ++  A  T
Sbjct: 661  QIFGAMQGIQEAFIIAVPPPSVRGIGNSGGFKMQIMDRQSADMRRALGLAYQMMGAANQT 720

Query: 717  PELAGVFSSYKIGTPELYADLDRTKAAQLGVDVQEVFDTMQIYLGSLYVNDFNKFGRTYQ 776
              L GVF+++   +P+ +  +DR KA  L V +  +F+T+ I LG+ YVNDFN FGR YQ
Sbjct: 721  EGLTGVFTTFTASSPQFFLAIDRDKARALNVPIPNIFETLSINLGTSYVNDFNAFGRVYQ 780

Query: 777  VIAQADGAFRSKPDDILRLQTRNFDGRMVPLGAVVTLSDTSGPDSAMRYNAFRSADLNGG 836
            V AQAD  FR + +DIL L+ R+  G +VPLG +V + DTSGP    RYN + S  + G 
Sbjct: 781  VRAQADQQFRLEREDILALKVRSASGALVPLGTLVEIRDTSGPALVQRYNMYVSVPVQGN 840

Query: 837  PAPGYSTGQAQGAMTKLLAETLPKGMDFEWTELTYQQILAGNTTMMVFPLCVLLVFLVLA 896
            PAPG STG A   M  L  + LP+G  FEWTEL  Q+   GNT + +F L V+ VFL L+
Sbjct: 841  PAPGVSTGSALDKMEALAGQILPQGTTFEWTELALQERQTGNTAVFIFALSVVFVFLALS 900

Query: 897  AQYESLFLPLAIILIVPLCLLSAITGVWLTGGDNNMFTQIGLFVLIGLACKNAILIVEFA 956
            AQYES  LPLAIILIVPL +L+A+ GV + G DNN+ TQIGL VLIGLA KNAILIVEFA
Sbjct: 901  AQYESWVLPLAIILIVPLAVLAALLGVSIRGFDNNVLTQIGLIVLIGLAAKNAILIVEFA 960

Query: 957  RELEIDGQDTVPAAIEAARLRLRPILMTSIAFIMGVVPLVISSGAGAEMRHAMGIAVFSG 1016
            R+ E +G+  + AAI+A+RLRLRPILMT+ AFI+GVVPLVI++G GAEMR ++G AVF+G
Sbjct: 961  RQGEEEGKTPIEAAIDASRLRLRPILMTAFAFILGVVPLVIATGPGAEMRQSLGTAVFAG 1020

Query: 1017 MLGVTVFGLFLTPVFYVLMRSLEKR 1041
            MLGVT  GLFLTPVFYV +RSL ++
Sbjct: 1021 MLGVTFLGLFLTPVFYVALRSLRRK 1045