Pairwise Alignments

Query, 577 a.a., ABC transporter component (NCBI) from Rhodospirillum rubrum S1H

Subject, 720 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

 Score =  184 bits (467), Expect = 1e-50
 Identities = 151/507 (29%), Positives = 243/507 (47%), Gaps = 21/507 (4%)

Query: 79  HLAHGVDADLCGDLRRRLLTHLERAPLDWF-SRQGQDGVARLADQDVRALHQLVAHAPTD 137
           H A+ +D  L      +L+ HL   PL +F SRQ    V R+ + D   + + +  +   
Sbjct: 225 HTANRIDIQL----GLKLVQHLFGLPLMFFKSRQVGAIVTRVRELDT--IREFLTGSMFT 278

Query: 138 LSSLVVVPFAALLCLAWLQPAL--LVFCLVPLAAAAAGFALLRSPAYRDEGTRRDAALER 195
           L+  ++  F  L  ++ L   L  L    VP     A +   R  A  ++     AA   
Sbjct: 279 LTVELLFMFVFLYVMSLLSAPLTGLFIATVPCYVLLAWWLTPRMQAAIEKQFSHAAANTS 338

Query: 196 LSVDYGEFAQNLPLARQYPGAGVQRGVELSAKGFESAFSAWV--KRVGHVAALIELVLGG 253
              +    ++ L      P   ++R  E + K   + +       R  H+  L++ +   
Sbjct: 339 FLTETVAGSETLKSLAVEPRF-IRRWDEQTEKMVTTGYDVQQLNNRSNHLVQLLQKITS- 396

Query: 254 PWLMAWVLLGAMALAVLGMPLAVGPLCAFLLLTRAMAAPIQAMGHGADALMGARAAAERL 313
              +A + LGA    VL + + +G L AF ++T  +A P+  M       +  R A E+L
Sbjct: 397 ---VAILWLGATE--VLSLEMTIGQLIAFNMMTNHIAQPLARMVELWGQFIQTRVAIEKL 451

Query: 314 QAVCDLPPLSEGRAGQIPRDGSVVVRGLRFSY-PD-REVLKGVDLDLAEGGLNALVGPSG 371
             + +LP      +  +   G++  + + F Y PD    +  + LD+  G    +VG SG
Sbjct: 452 GDMLNLPVEQHTGSDNVTISGAISFKNILFRYQPDIPPTINDLSLDIRAGETLGVVGTSG 511

Query: 372 SGKSTMLHVLARHMDPQAGTILVGGVPLRDLPDAVRHRHIVMLTQQAVALDLSLRENIAL 431
           SGKST+  +L R   P+ G+I + G+PL  +      + + ++ Q+      S+ ENIA 
Sbjct: 512 SGKSTLARLLLRLYSPEQGSITIDGIPLNHINVQQLRQRVGVVLQENFLFHKSVSENIAQ 571

Query: 432 LCPEAKFEDIRQAARDARLDDAIMALPRGYDS-LSGRDVKLSGGEVQRLALARALLSSAR 490
             PEA  E+I +AA+ +   D I+ LP GYD+ L+     LSGG+ QRLA+AR LLS  +
Sbjct: 572 SKPEASLEEIIEAAKLSGAHDFILKLPMGYDTVLAEGGQSLSGGQRQRLAIARTLLSDPK 631

Query: 491 LFLLDEPTSATDPQTAQALHRAVRERLAGRTRLIVCHRLSEVSDADRIVVCHEGRFVAQG 550
           + +LDE TSA D ++   +   +     GRT + + HRLS V D DRI+V H+G  V QG
Sbjct: 632 VLILDEATSALDDESQAVIQANMASIARGRTVITIAHRLSTVRDCDRIIVLHQGTIVEQG 691

Query: 551 THAHLLSSGGLYADLWRDQRRAEGEAA 577
           +H  LL+ G  Y  LW+ Q+  + E A
Sbjct: 692 SHQQLLAYGKQYKQLWQLQQELKQEEA 718