Pairwise Alignments

Query, 296 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

Subject, 308 a.a., ABC transporter permease from Rahnella sp. WP5

 Score =  325 bits (832), Expect = 1e-93
 Identities = 157/292 (53%), Positives = 209/292 (71%)

Query: 5   AWLFTETPASRRQARWGALARGGVALLGNRLVCGGLAVVIALGVVAVFAPALAPYDPLVQ 64
           AWL  +TP +R QA WG   R  + L  N L   GL  V+ + ++++ AP L  YDP  Q
Sbjct: 16  AWLLADTPHTRTQAVWGRRYRIWLGLRKNPLAVTGLFTVLIVLLISLCAPWLTSYDPGAQ 75

Query: 65  DLSQRLRPPSAAHWLGTDHLGRDIFSRVLCGTPITLSIVTIAALTVLPVSLIIGMVAGFF 124
           DL+ RL  PS+ HWLGTD LGRD  SR+L G  ITL +V I    V P+ L+IG VAG+ 
Sbjct: 76  DLAHRLAKPSSLHWLGTDELGRDTLSRILYGGRITLGMVIIVVAIVAPLGLLIGCVAGYA 135

Query: 125 GGIVDAVLMRTTDVFLSFPLLVLALALAAALGPGLVNAVIAIALTAWPPLARLVRAETRR 184
           GG++D +LMR TD+FL+FP L+LALA  AAL PG+ +A++AIALTAWPP ARL RAET +
Sbjct: 136 GGLLDRILMRITDIFLAFPRLILALAFVAALKPGIESAILAIALTAWPPYARLARAETMQ 195

Query: 185 LKQADFVAATRLQGASALRLLSFDILPLVLPAALTRLSLDLAGMILIAASLGFLGLGAQP 244
           ++  D++AA RL GA+  R++   I+PL +P+ + R++LD++ +I+ AASLGFLG+GAQP
Sbjct: 196 VRGTDYIAACRLTGATPARIVLRHIMPLCVPSLVVRITLDMSSIIITAASLGFLGMGAQP 255

Query: 245 PSPEWGAMVAAGRTFLMDQWWVATLPGVAIFIVSFAFNLLGDGVSEVLDPKE 296
           PSPEWGAM+A  R FL  +WWV  +P +AIF+ S AFN LGDG+ +VLDPKE
Sbjct: 256 PSPEWGAMIATARRFLFSEWWVPLIPAIAIFVTSLAFNFLGDGLRDVLDPKE 307