Pairwise Alignments

Query, 296 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

Subject, 311 a.a., ABC transporter permease from Rahnella sp. WP5

 Score =  296 bits (757), Expect = 5e-85
 Identities = 152/299 (50%), Positives = 204/299 (68%), Gaps = 14/299 (4%)

Query: 2   TLSAWLFTETPASRRQAR-------WGALARGGVALLGNRLVCGGLAVVIALGVVAVFAP 54
           +L AWL    PA+  QAR       W    R   AL G       L V++ +  VA+FAP
Sbjct: 16  SLRAWLDAPVPATPWQARVQQSLNQWRRFRRNTSALFG-------LIVILFIVTVAIFAP 68

Query: 55  ALAPYDPLVQDLSQRLRPPSAAHWLGTDHLGRDIFSRVLCGTPITLSIVTIAALTVLPVS 114
            LA +D   Q+L  RL P S  +WLGTD LGRDI+SR++ G  ITL I  + AL V P+ 
Sbjct: 69  WLATHDIYAQNLQLRLAPVSREYWLGTDELGRDIYSRLIYGARITLYITGLTALIVGPLG 128

Query: 115 LIIGMVAGFFGGIVDAVLMRTTDVFLSFPLLVLALALAAALGPGLVNAVIAIALTAWPPL 174
           L++G +AG  GG  D +LMR  D+FL+FP L+LAL   AALGPG+ NA+IAI+L+AWPP+
Sbjct: 129 LLVGTLAGTVGGWTDTILMRIVDIFLAFPSLILALGFVAALGPGIENAIIAISLSAWPPI 188

Query: 175 ARLVRAETRRLKQADFVAATRLQGASALRLLSFDILPLVLPAALTRLSLDLAGMILIAAS 234
           ARL RAE   +++ D+VAA RLQGAS +R++   I+P+ LP+ + RL+L++AG+IL A+ 
Sbjct: 189 ARLARAEALSIRKMDYVAAVRLQGASQMRIILRHIIPMCLPSVVVRLTLNMAGIILTASG 248

Query: 235 LGFLGLGAQPPSPEWGAMVAAGRTFLMDQWWVATLPGVAIFIVSFAFNLLGDGVSEVLD 293
           LGFLGLGAQ PSPEWGAM+++GR F+M  W +A +PG++I   S AFNL GDG+ +VLD
Sbjct: 249 LGFLGLGAQAPSPEWGAMLSSGRQFMMTHWTIAAIPGLSILFTSLAFNLFGDGLRDVLD 307