Pairwise Alignments

Query, 296 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

Subject, 305 a.a., ABC transporter permease from Pseudomonas fluorescens SBW25-INTG

 Score =  313 bits (803), Expect = 2e-90
 Identities = 154/278 (55%), Positives = 204/278 (73%), Gaps = 4/278 (1%)

Query: 22  ALARGGVA----LLGNRLVCGGLAVVIALGVVAVFAPALAPYDPLVQDLSQRLRPPSAAH 77
           AL + GV     LL N +   GL V + L VVA FAP +A +DP+ Q+L+  L+ P AAH
Sbjct: 26  ALCKSGVRILRHLLRNPMTLAGLLVALLLIVVAAFAPWIATHDPVAQNLANALQAPGAAH 85

Query: 78  WLGTDHLGRDIFSRVLCGTPITLSIVTIAALTVLPVSLIIGMVAGFFGGIVDAVLMRTTD 137
           W GTD  GRDIFSR++ G+ ITL I+ +  + V P+ L IG V+G+FGG VD V MR TD
Sbjct: 86  WFGTDEYGRDIFSRLVYGSRITLYIIALVTVIVGPIGLFIGTVSGYFGGAVDTVFMRLTD 145

Query: 138 VFLSFPLLVLALALAAALGPGLVNAVIAIALTAWPPLARLVRAETRRLKQADFVAATRLQ 197
           +F+SFP LVLALA  AALGPGL +AV+AIALT+WPP+ARL RAET  L+ ADFV A  LQ
Sbjct: 146 IFISFPSLVLALAFIAALGPGLEHAVVAIALTSWPPIARLARAETLSLRNADFVVAVELQ 205

Query: 198 GASALRLLSFDILPLVLPAALTRLSLDLAGMILIAASLGFLGLGAQPPSPEWGAMVAAGR 257
           GAS  R++   I+P+ L + + RL++++AG+IL AA+LGFLGLGAQ P PEWGAM++ GR
Sbjct: 206 GASPARIILRHIVPMCLSSVIIRLTMNMAGIILTAAALGFLGLGAQAPLPEWGAMISTGR 265

Query: 258 TFLMDQWWVATLPGVAIFIVSFAFNLLGDGVSEVLDPK 295
            ++++ WW+  +PG AI +VS AFNLLGDG+ ++LDP+
Sbjct: 266 RYMLECWWLVAVPGAAIMLVSLAFNLLGDGLRDILDPR 303