Pairwise Alignments

Query, 411 a.a., major facilitator transporter superfamily MFS_1 (NCBI) from Rhodospirillum rubrum S1H

Subject, 386 a.a., arabinose transporter permease from Pseudomonas fluorescens FW300-N2C3

 Score =  167 bits (423), Expect = 5e-46
 Identities = 115/369 (31%), Positives = 185/369 (50%), Gaps = 2/369 (0%)

Query: 15  LWVLGLGTFAIGTDAFIVAGVLREIADDFAVSGAAAGQLITLFAVSYAVFAPVSAWLLGG 74
           L  L +  F IGT  F++ G+L ++A D AVS   AG LIT +A+     AP+ A     
Sbjct: 5   LLALAVAAFGIGTTEFVIMGLLPDVARDLAVSIPQAGLLITGYALGVVFGAPILAIGTAN 64

Query: 75  WGRRRSLLFALGVFALGNIVSAAAPSFALLALSRIIAAFGAASYTPQAVAVAAQLVPPER 134
             R+ +LL    +F LGN++ A AP++  L  +R+I A    ++      VAA LV P +
Sbjct: 65  MPRKATLLGMTLMFILGNVLCALAPNYTTLMAARVITALCHGAFFGIGSVVAAGLVAPNK 124

Query: 135 KGWALSIVYGGMTVATALGIPFGTLIGQTLGWRATFIGVVGLGLLTLAGLAVLLPALAAP 194
           +  A+++++ G+T+A  LG+P GT +GQ  GWR+TF  V  +G++      V LP     
Sbjct: 125 RAQAIAMMFTGLTLANVLGVPLGTALGQYAGWRSTFWAVSIIGVIAAIAQWVWLPKEIPM 184

Query: 195 GIHTLRERFAAVSRPAVLAPLGITFLAVLSEHTVYSYISLILADTLWDGLPVLPIALVFF 254
               L   F  + +  VL  LG++ LA  S  +V++YI+ IL D        + + L+ F
Sbjct: 185 DKANLASEFKVLGKANVLLALGMSVLASTSLFSVFTYIAPILQDITGVSPHGITVMLLLF 244

Query: 255 GIGAVAGNAASGYGSDRFGTRSVLIFAISAQTAALLGVSLVQPSPLLSCLVLLVWGMAGW 314
           G+G  AG+   G  +DR    S++  A+ A    L   S    S + + + L++WG+  +
Sbjct: 245 GVGLTAGSFLGGRLADRRLLPSLVGMAL-AVVLVLAAFSQTSRSVIPAAITLVLWGIFAF 303

Query: 315 MYLVPIQHRLLGLSKTYGSFTVSLNSSVLYLGIGGGGALGGLFITLFGP-ASLGFLGFAL 373
                +Q  ++  +    +   +LN S   LG   G  +GGL +      A L + G A+
Sbjct: 304 ALCPILQLLIIDQAHEAPNLGSTLNQSAFNLGNAAGAWMGGLVVASGADLADLPWTGAAV 363

Query: 374 GLLALALAL 382
           G L +  AL
Sbjct: 364 GGLTVLTAL 372