Pairwise Alignments

Query, 411 a.a., major facilitator transporter superfamily MFS_1 (NCBI) from Rhodospirillum rubrum S1H

Subject, 385 a.a., arabinose efflux permease from Herbaspirillum seropedicae SmR1

 Score =  168 bits (426), Expect = 2e-46
 Identities = 112/383 (29%), Positives = 186/383 (48%), Gaps = 4/383 (1%)

Query: 15  LWVLGLGTFAIGTDAFIVAGVLREIADDFAVSGAAAGQLITLFAVSYAVFAPVSAWLLGG 74
           L+ L +  F IGT  F++ G+L ++A D  V+  AAG L++ +A+  A  AP+ A L   
Sbjct: 5   LFALAVAAFGIGTTEFVIMGLLPDVARDLGVTAPAAGMLVSGYALGVAAGAPILAILTAK 64

Query: 75  WGRRRSLLFALGVFALGNIVSAAAPSFALLALSRIIAAFGAASYTPQAVAVAAQLVPPER 134
           W R+++L+  + +F LGN++ A AP++  L ++R++ AF  A++      VAA+LV P++
Sbjct: 65  WPRKQALVGLMCLFILGNVLCALAPNYVFLMVARVVTAFCHAAFFGIGSVVAAELVAPQK 124

Query: 135 KGWALSIVYGGMTVATALGIPFGTLIGQTLGWRATFIGVVGLGLLTLAGLAVLLPALAAP 194
           +  A+++++ G+TVA  LG+P GT  G   GWR+TF  V  +G+L    L  +LP     
Sbjct: 125 RAQAVALMFTGLTVANILGVPLGTAFGHAAGWRSTFGAVTAIGVLAAIMLWTMLPKKIPM 184

Query: 195 GIHTLRERFAAVSRPAVLAPLGITFLAVLSEHTVYSYISLILADTLWDGLPVLPIALVFF 254
               + + F ++    V   L  + LA +S  +V +YI+ IL D            L+ F
Sbjct: 185 QAGNIFQEFRSIIDTRVQLSLLTSTLASISMFSVITYIAYILLDVTGFTTQQESWVLLLF 244

Query: 255 GIGAVAGNAASGYGSD-RFGTRSVLIFAISAQTAALLGVSLVQPSPLLSCLVLLVWGMAG 313
           G G   G    G  +D +       +F   A    L  ++     P L+   +  WG   
Sbjct: 245 GAGITVGGLVGGKLADWKLMPVMCGVFLCIAVVLGLFSITSHYKWPTLA--TMFAWGAFA 302

Query: 314 WMYLVPIQHRLLGLSKTYGSFTVSLNSSVLYLGIGGGGALGGLFITLFGP-ASLGFLGFA 372
           +  +   Q R+L  ++   +   +LN     LG   G  +GGL I+   P   L  +G  
Sbjct: 303 FAVVPGAQIRVLDTARGAPNLASTLNQGAFNLGNATGAWVGGLAISAGLPLTDLPLIGAF 362

Query: 373 LGLLALALALTAYEAGDRDQPPS 395
             LL LA    +     R + P+
Sbjct: 363 FALLGLATVAFSASLDKRVRAPA 385