Pairwise Alignments

Query, 487 a.a., Nitrogenase (NCBI) from Rhodospirillum rubrum S1H

Subject, 500 a.a., NifD nitrogenase molybdenum-iron protein alpha chain from Sinorhizobium meliloti 1021

 Score = 83.6 bits (205), Expect = 1e-20
 Identities = 102/414 (24%), Positives = 176/414 (42%), Gaps = 38/414 (9%)

Query: 65  IEDAVVINHAPVGCAGDFAQLNRCRRRGQGKRAMEVTNARLLSTALTEHDTIFGGAQKLA 124
           I+D V I+H PVGC G ++   R R    G   ++       ++   E D +FGG +KL 
Sbjct: 85  IKDMVHISHGPVGC-GQYSWSQR-RNYYVGTTGIDAFVTMQFTSDFQEKDIVFGGDKKLE 142

Query: 125 ETIDQAVARYHP--RAIFVTASCASGIVGEDIDSVVTEAEERHAIPVVAIDCVGFRTQVW 182
           + ID+ +    P    + V + C  G++G+DI++V  +  E +   +V + C GFR    
Sbjct: 143 KIIDE-IEELFPLNNGVTVQSECPIGLIGDDIEAVSRKKAEEYKTTIVPVRCEGFRGVSQ 201

Query: 183 ATGFDMAYDAL------LRKIVKPAVTKRPEVVNIVCFSGKKAYFSELLEPLGL-VANPI 235
           + G  +A DA+        ++   A      V+      G       LLE +GL V    
Sbjct: 202 SLGHHIANDAIRDWVFDTTEVAYEAGRYDVNVIGDYNIGGDAWASRILLEEIGLHVVGNW 261

Query: 236 VQFLTVAEIETLSEAGATAHMCPTLGTWLGAGLERRFGVPEVKAPPPYGLAGTDHWLRAL 295
               T+AEIE    A      C     ++   +E ++GVP ++    +G +  +  LR +
Sbjct: 262 SGDATLAEIERAPTAKLNLIHCYRSMNYICRHMEEKYGVPWMEY-NFFGPSQIEASLRQI 320

Query: 296 AALTGR--SDRVEAYIAAERAAIAPDLADLRAQLAGRTAFVAAGSAQGHSFMTVLRDLGI 353
           A   G    +R E  IA         +     +L G+   +  G  +    +T   DLG+
Sbjct: 321 AKHFGPEIEERAERVIAKYSGLTDAVIDKYWPRLHGKRVMLYVGGLRPRHVITAYEDLGM 380

Query: 354 DVIGGC--ALHHDPVLDHGHQ-EEDTLAHATRDKAEVPYGVCNKQSFELINLVGKLKPDI 410
           +++G      H+D     GH  +E TL +             +   +EL   + +++PD+
Sbjct: 381 EIVGTGYEFAHNDDYQRTGHYVKEGTLIYD------------DVTGYELEKFIERIRPDL 428

Query: 411 L--LIRHPGLVVWGAKLGIPTLYVED-EHAG--IGYRGLIRYGRKIADWIANPV 459
           +   I+    V    K+GIP   +   +++G   GY G   + R +   + NPV
Sbjct: 429 VGSGIKEKYSV---QKMGIPFRQMHSWDYSGPYHGYDGFAIFARDMDLAVNNPV 479