Pairwise Alignments

Query, 510 a.a., hypothetical protein (NCBI) from Rhodospirillum rubrum S1H

Subject, 360 a.a., cytoskeleton protein RodZ from Vibrio cholerae E7946 ATCC 55056

 Score = 79.0 bits (193), Expect = 3e-19
 Identities = 75/272 (27%), Positives = 120/272 (44%), Gaps = 35/272 (12%)

Query: 21  GALLRATRLRVGEPIARVAESLRIRQGYLQAIEEGRYQDLPGAAYAVGFVRAYADHLGLH 80
           G LL+  R  +G    ++A+ LR+R   +Q+IEE R++D   A +  G++R+YA  +G+ 
Sbjct: 28  GTLLKQKREDLGLTQRQIADRLRLRLSIIQSIEENRFEDGQVATFTRGYLRSYAKAVGIR 87

Query: 81  AEEVVRRFKD------ETQSMAPAATLEFPAPAGEGGVPAGALVAVALILAACAYGAWYW 134
             E++  F D      E Q    + + +      +  +     V +A+I+       W+W
Sbjct: 88  ESEILCAFDDSYCQKPEVQPDMKSFSKKTKRQLHDSRIMLITWVILAVIVGMST--LWWW 145

Query: 135 VSSAEKPVAELIPD----IPDRLAALVGRSPGLPPGPSPAGEPLPVAPP-----QAGPSG 185
            +S +     LIPD     P  ++ +   +       S A E     PP      A P+ 
Sbjct: 146 QNSQKN---SLIPDKTTIAPSAISDIQSSNDA-----SLANEDFATVPPLNELQDAAPAS 197

Query: 186 ENAP-ADPAMAGSPVETLMPGPDDEPRGATDPTSGLPLV---SAFPVAPVTPIDQGATAE 241
           E AP +  +++G   E   P P++      D  +  P+V   +A PVAP  P  Q     
Sbjct: 198 EEAPMSQESLSGEASELTPPAPNE-----ADVVTDKPVVEETAAAPVAPAQPQGQTPVQS 252

Query: 242 AKPDAAAPEPQAEASSQPEPEVLVSHTPESPS 273
             P AAAP  Q EA+    P   VS + ES S
Sbjct: 253 QAPVAAAPVTQPEAAPS-APSQPVSSSTESAS 283



 Score = 26.2 bits (56), Expect = 0.002
 Identities = 29/104 (27%), Positives = 39/104 (37%), Gaps = 20/104 (19%)

Query: 253 AEASSQPEPEVLVSHTPESPSGAPLPPPPRGNAVDEEPAPPPVVAAPPKTPAEPAVTVVQ 312
           A  +S+  P    S + E+    P P P   + V ++P      AAP             
Sbjct: 193 AAPASEEAPMSQESLSGEASELTP-PAPNEADVVTDKPVVEETAAAPVA----------- 240

Query: 313 RPEPARPAQPTPEPAKPAQPTPEPAKPAQPTPEPARPAPSTPPS 356
              PA+P   TP  ++     P  A P    PE A  APS P S
Sbjct: 241 ---PAQPQGQTPVQSQ----APVAAAPV-TQPEAAPSAPSQPVS 276