Pairwise Alignments

Query, 354 a.a., 2-nitropropane dioxygenase, NPD (NCBI) from Rhodospirillum rubrum S1H

Subject, 359 a.a., hypothetical dioxygenase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 80.5 bits (197), Expect = 6e-20
 Identities = 80/297 (26%), Positives = 115/297 (38%), Gaps = 56/297 (18%)

Query: 26  GCDTAILGGAMAWVSERHLVSAISGAGGFGVIACGSMPSDLLSKEIAATRALLEGMGGER 85
           G +  I+   MA V    L  A+S AGG G + C  +  + L  E+ A R+        +
Sbjct: 10  GIEFPIIQAPMAGVQGSALAIAVSEAGGLGSLPCAMLSLEALEAELTAIRSQTA-----K 64

Query: 86  PFGVNLITMHPE-----------------------LDRLIDLCGEHRVSHV-----VLAG 117
           P  VN    H E                       LD      G  R  +      VLA 
Sbjct: 65  PINVNFFC-HREPVAQAAKQAAWLEQLAPYFAEFNLDPNAQPAGAQRTPYSKAQAEVLAK 123

Query: 118 ----------GLPSAASIKRVKDLGARCICFAPALALARKLVRSGADALVIEGAEAGGHI 167
                     GLP    +  +K  G++ I  A  +  A  L   GADA++ +G EAGGH 
Sbjct: 124 FKPEVVSFHFGLPDEELLLEIKSWGSKVISTATTVEEALWLEARGADAIIAQGLEAGGHR 183

Query: 168 GPVSTSVLAQE-----ILPEV---PEIPIFVAGGIGRGEAILSYLEMGAAGVQIGTRFVC 219
           G   +  L ++     +LP++    EIP+  AGGI     + + + MGA+ VQ+GT ++ 
Sbjct: 184 GHFLSEDLTEQLGTFSLLPQIIAAVEIPVIAAGGIVDATTVRAAMTMGASAVQVGTAYLL 243

Query: 220 ATECIAHPNFKKAFIRASARDAVPTIQIDPQFPVIPVRALANKGTARFMEMQRTVID 276
             EC    N       A   DA     +   F   P R + N+  A    M   V D
Sbjct: 244 CPEC----NTSAIHREALQSDAAQHTALTNLFSGRPARGIVNRFMAEMGPMNEAVPD 296