Pairwise Alignments

Query, 224 a.a., Anti-Sigm factor, ChrR (NCBI) from Rhodospirillum rubrum S1H

Subject, 226 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  105 bits (262), Expect = 7e-28
 Identities = 72/227 (31%), Positives = 112/227 (49%), Gaps = 15/227 (6%)

Query: 3   LSHHPSESLLAAYAAGVLGEGASLIVAAHLTLCPHCRGAVDHLEALGGALLEEMAPLALA 62
           +S+HP+ +LLAAYA G L     L ++AHL +CPHCR  V  +EA  G LL + A  ++A
Sbjct: 1   MSYHPNYALLAAYAEGGLDSAHGLAISAHLEICPHCRDLVHEIEAELGELLNQQAASSVA 60

Query: 63  -------EGALDAVLARLDTPAAPSPTRATASRLPPPMGEAALLPAPLRRHLADPSAATL 115
                  +   D+++A     A+ +P + T   +    G+   +P  L R L  P     
Sbjct: 61  LSDDANWQAMFDSIVALPQQAASNTPVKTTPV-MVTVNGKQIAIPKVLAR-LVKPEQ--- 115

Query: 116 PWRAIAPGIRQIALLPRTAGGGNAHLLKIAPKTALPRHGHHGQEYTLVLAGAFQDRSERF 175
            WR+   G +  +L  ++      +L+ I+   ++P+H H G E TLVL G F D +  +
Sbjct: 116 QWRSY--GGKVFSLPLQSEDNVRMNLMYISQGVSIPQHTHKGFESTLVLHGGFSDENGHY 173

Query: 176 ARGDVAEVEADRVHQPIT-DGQDCLCLVVTEGPLRYMGMIPRLMQPF 221
             GD  + +    H P T   QDCLCL V   P+ +   + R+   F
Sbjct: 174 DVGDFMQHDGQICHSPSTPQDQDCLCLTVLTEPMVFTQGVARIFNLF 220