Pairwise Alignments

Query, 310 a.a., RarD protein (NCBI) from Rhodospirillum rubrum S1H

Subject, 293 a.a., chemotaxis protein from Pseudomonas fluorescens FW300-N2E3

 Score =  118 bits (296), Expect = 1e-31
 Identities = 83/287 (28%), Positives = 148/287 (51%), Gaps = 14/287 (4%)

Query: 19  ARGVAAALGAYGVWGISPLFFKAVSEVSALEILSHRVLWAMVVMGITLGLRGELAASLRF 78
           ++G+A ++ A  ++ +   +   +S +S +EI   R+L  +  M + + + GE    +  
Sbjct: 2   SKGIALSVTASVLFAVMYFYTSLLSPLSGVEIFGWRMLLTVPCMTVFMVVSGEWRRVVEI 61

Query: 79  LANRRV------FLLMLAATVAISINWLTFIHAATSGHAMQGSLGYYIFPLVTVVLGRLV 132
           L  RRV      F  +L ++  + +    F+ A  +GH++  SLGY++ PL  V+ GR+V
Sbjct: 62  L--RRVGSKPALFGGLLVSSALLGVQLWLFMWAPLNGHSLDVSLGYFLLPLTMVLTGRIV 119

Query: 133 LGEEMSRRQGLAVALAAAGVGIALWRTGSLPWISLTLASTFALYGLIRKTVSVPPLAGLF 192
            GE++S  Q +A   A  GV   L++ GS  W +L +A  +  Y ++R+ ++   L GL+
Sbjct: 120 YGEQLSYLQKIAAFFATLGVLNELYQVGSFSWATLLVAIGYPTYFVLRRRLASDNLGGLW 179

Query: 193 IEALLLSPVLIGLLAWIELKGGGLAFFD-GPWGRSLWLMALGPLTAVPLFFFTWAARRLR 251
           ++  L+ PV  G   ++     G A FD  PW  SL +  LG ++A  L  +  A+R L 
Sbjct: 180 LDMTLMLPVAYG---FVHSGEQGFAVFDQHPW-LSLLIPMLGVISASALVVYIIASRLLP 235

Query: 252 LSTLGVIQYTNPTIQFALAALVFKEPVTTTELLTFGFIWAGVALYLW 298
            S  G++ Y  P +   + AL+  E +   E LT+  IW  V + ++
Sbjct: 236 FSLFGLLSYVEPVLLLGV-ALLLGESIKAGEWLTYIPIWLAVLVLVF 281