Pairwise Alignments
Query, 310 a.a., RarD protein (NCBI) from Rhodospirillum rubrum S1H
Subject, 295 a.a., chloramphenical resistance permease RarD from Pseudomonas fluorescens FW300-N2E3
Score = 224 bits (571), Expect = 2e-63
Identities = 125/285 (43%), Positives = 173/285 (60%), Gaps = 7/285 (2%)
Query: 15 AGSSARGVAAALGAYGVWGISPLFFKAVSEVSALEILSHRVLWAMVVMGITLGLRGELAA 74
A + RG L AY +WG+ PL+FKA+++V A+EI+ HRVLW+ + + L +
Sbjct: 3 AANLRRGYILGLSAYIIWGLFPLYFKAIADVPAVEIIIHRVLWSALFGALLLMVWKHPGW 62
Query: 75 SLRFLAN-RRVFLLMLAATVAISINWLTFIHAATSGHAMQGSLGYYIFPLVTVVLGRLVL 133
N RR+ +L L+ T+ I+ NWLT++ A +G ++ SLGYYI PLV V+LG L+L
Sbjct: 63 WRELRENPRRLAVLALSGTL-IAANWLTYVWAVNNGRMLEASLGYYINPLVNVLLGMLIL 121
Query: 134 GEEMSRRQGLAVALAAAGVGIALWRTGSLPWISLTLASTFALYGLIRKTVSVPPLAGLFI 193
GE + R Q +AV LAA GV +W+ GSLPW+SL LA TF YGLIRK V L GL +
Sbjct: 122 GERLRRLQWVAVGLAAVGVAQQVWQVGSLPWVSLVLALTFGFYGLIRKQAPVKALPGLVV 181
Query: 194 EALLLSPVLIGLLAWIELKGGGLAFFDGPW--GRSLWLMALGPLTAVPLFFFTWAARRLR 251
E +L P+ LAW+ + W + WL+A GP+T VPL F AAR L
Sbjct: 182 ETWMLVPI---ALAWLLFNPTATSAQAAFWTTSEAWWLVAAGPVTLVPLVCFNAAARHLP 238
Query: 252 LSTLGVIQYTNPTIQFALAALVFKEPVTTTELLTFGFIWAGVALY 296
+TLG +QY PT+ A L+F E +++T L+ F FIWAG+A+Y
Sbjct: 239 YTTLGFLQYLAPTLVLLQAVLLFGEHLSSTTLVAFMFIWAGLAVY 283
Score = 38.9 bits (89), Expect = 1e-07
Identities = 35/142 (24%), Positives = 58/142 (40%), Gaps = 4/142 (2%)
Query: 165 ISLTLASTFALYGLIRKTVSVPPLAGLFIEALLLSPVLIGLLAWI-ELKGGGLAFFDGPW 223
+ L+ + L+ L K ++ P + I +L S + LL + + G + P
Sbjct: 12 LGLSAYIIWGLFPLYFKAIADVPAVEIIIHRVLWSALFGALLLMVWKHPGWWRELRENP- 70
Query: 224 GRSLWLMAL-GPLTAVPLFFFTWAARRLRLSTLGVIQYTNPTIQFALAALVFKEPVTTTE 282
R L ++AL G L A + WA R+ + Y NP + L L+ E + +
Sbjct: 71 -RRLAVLALSGTLIAANWLTYVWAVNNGRMLEASLGYYINPLVNVLLGMLILGERLRRLQ 129
Query: 283 LLTFGFIWAGVALYLWPVRKDP 304
+ G GVA +W V P
Sbjct: 130 WVAVGLAAVGVAQQVWQVGSLP 151