Pairwise Alignments

Query, 310 a.a., RarD protein (NCBI) from Rhodospirillum rubrum S1H

Subject, 304 a.a., EamA family transporter RarD from Rahnella sp. WP5

 Score =  219 bits (559), Expect = 5e-62
 Identities = 121/283 (42%), Positives = 164/283 (57%), Gaps = 1/283 (0%)

Query: 15  AGSSARGVAAALGAYGVWGISPLFFKAVSEVSALEILSHRVLWAMVVMGITLGLRGELAA 74
           A  + +GV  A  AY +WGI+P +FK + +V A EIL+HRV+W+   M + L +      
Sbjct: 3   AHRTRQGVIFAFIAYLIWGIAPAYFKLIKQVPADEILTHRVIWSFFFMLVLLSVSRSWGD 62

Query: 75  SLRFLANRRVFLLMLAATVAISINWLTFIHAATSGHAMQGSLGYYIFPLVTVVLGRLVLG 134
             R LA  +   ++L   + +  NWL FI A    H ++ SLGY+I PLV VVLG L L 
Sbjct: 63  VRRVLAQPKKIGMLLITALLVGGNWLIFIWAINHNHILEASLGYFINPLVNVVLGMLFLR 122

Query: 135 EEMSRRQGLAVALAAAGVGIALWRTGSLPWISLTLASTFALYGLIRKTVSVPPLAGLFIE 194
           E     Q  AVALA AGV + +W  GS+P I++ L+ TFA YGL+RK + V    G+ IE
Sbjct: 123 ERFRSLQWFAVALAFAGVLVQVWVFGSVPVIAIGLSLTFAFYGLLRKKIGVDSQTGMLIE 182

Query: 195 ALLLSPVLIGLLAWIELKGGGLAFFDGPWGRSLWLMALGPLTAVPLFFFTWAARRLRLST 254
            L L PV  G+  +             PW   L LMA G +T +PL FFT AA RL+LST
Sbjct: 183 TLWLLPV-AGIYLFFIAHSQTSNLAANPWSLDLLLMAAGIITTIPLLFFTAAAARLKLST 241

Query: 255 LGVIQYTNPTIQFALAALVFKEPVTTTELLTFGFIWAGVALYL 297
           LG  QY  PT+ F LA + + E V T++L+TFGFIW G+  ++
Sbjct: 242 LGFFQYLGPTLMFLLAVVFYGETVNTSQLITFGFIWVGLLCFI 284



 Score = 27.3 bits (59), Expect = 5e-04
 Identities = 12/56 (21%), Positives = 22/56 (39%)

Query: 243 FTWAARRLRLSTLGVIQYTNPTIQFALAALVFKEPVTTTELLTFGFIWAGVALYLW 298
           F WA     +    +  + NP +   L  L  +E   + +       +AGV + +W
Sbjct: 90  FIWAINHNHILEASLGYFINPLVNVVLGMLFLRERFRSLQWFAVALAFAGVLVQVW 145