Pairwise Alignments

Query, 310 a.a., RarD protein (NCBI) from Rhodospirillum rubrum S1H

Subject, 295 a.a., transporter DMT superfamily protein (RefSeq) from Shewanella sp. ANA-3

 Score =  211 bits (536), Expect = 2e-59
 Identities = 116/278 (41%), Positives = 166/278 (59%), Gaps = 3/278 (1%)

Query: 20  RGVAAALGAYGVWGISPLFFKAVSEVSALEILSHRVLWAMVVMGITLGLRGELAASLRFL 79
           +G+  A+ AY +WG +PL+FK +  VSA EIL HRV+W+ V M I +   G      +  
Sbjct: 8   KGILLAVSAYCMWGFAPLYFKLLHHVSATEILLHRVIWSFVFMVIIMLFIGGFGKLRQLF 67

Query: 80  ANRRVFLLMLAATVAISINWLTFIHAATSGHAMQGSLGYYIFPLVTVVLGRLVLGEEMSR 139
              +  L++   ++ I+ NWL FI A  + H +  SLGY+I PL+ V+LG L LGE + +
Sbjct: 68  KQPKQLLVLTITSLLIAANWLIFIWAVNNDHMLDASLGYFINPLLNVLLGMLFLGERLRK 127

Query: 140 RQGLAVALAAAGVGIALWRTGSLPWISLTLASTFALYGLIRKTVSVPPLAGLFIEALLLS 199
            Q  AVALA+AGV I L   GS+P +SL LA TF +Y L+RK V+V   +GL +E  +L 
Sbjct: 128 LQWFAVALASAGVLIQLISFGSIPIVSLALAGTFGVYALLRKKVNVDAKSGLLVETAILL 187

Query: 200 PV-LIGLLAWIELKGGGLAFFDGPWGRSLWLMALGPLTAVPLFFFTWAARRLRLSTLGVI 258
           PV L+ L+A ++     +   D  W  +L LMA G +T +PL  F  AA R+ LS LG  
Sbjct: 188 PVALVYLVATLDSATANMLTND--WHLNLLLMAAGIVTTIPLLCFAGAAVRIPLSMLGFF 245

Query: 259 QYTNPTIQFALAALVFKEPVTTTELLTFGFIWAGVALY 296
           QY  P+I F LA  +F EP    + +TFGFIW+ + ++
Sbjct: 246 QYIGPSIMFILAVTLFNEPFDAEKSITFGFIWSALLVF 283