Pairwise Alignments

Query, 388 a.a., Predicted signal transduction protein (NCBI) from Rhodospirillum rubrum S1H

Subject, 444 a.a., chemotaxis protein CheY from Pseudomonas fluorescens FW300-N2E3

 Score = 86.3 bits (212), Expect = 2e-21
 Identities = 42/116 (36%), Positives = 78/116 (67%), Gaps = 4/116 (3%)

Query: 5   ILFVDDDINLLQALQRMLRGYRAEWEMVFVDDPRKALALLATRRFDVVVSDMRMPDLDGA 64
           +L VDD+ ++L +L+R+LRG    +E++      +AL ++  +  D+V++D RMP++DGA
Sbjct: 9   VLLVDDEESILNSLRRLLRGQ--PYEVLLATSGTQALEIMEQQPVDLVMTDARMPNMDGA 66

Query: 65  QLLSEVERLHPGTVRVILSGYAEESSLFRSV--GPAHQYLSKPCDPEAILALMARS 118
            LL+ +   +P TVR++L+GYA+ S + +++  G  H+Y+SKP + E +L  + +S
Sbjct: 67  TLLAHIHEHYPDTVRILLTGYADLSMIIKAINEGQIHRYISKPWNDEEMLLTLRQS 122