Pairwise Alignments

Query, 388 a.a., Predicted signal transduction protein (NCBI) from Rhodospirillum rubrum S1H

Subject, 367 a.a., response regulator from Xanthomonas campestris pv. campestris strain 8004

 Score =  145 bits (367), Expect = 1e-39
 Identities = 109/350 (31%), Positives = 170/350 (48%), Gaps = 25/350 (7%)

Query: 6   LFVDDDINLLQALQRMLRGYRAEWEMVFVDDPRKALALLATRRFDVVVSDMRMPDLDGAQ 65
           LFV D+ +L   L   +      W+   V D   A+   A   FD V+    +PDL  A 
Sbjct: 1   LFVGDEASLPSDLVDYIAELGDNWQAQQVPDGNSAIEAAALSPFDAVIVAPVLPDLTAAT 60

Query: 66  LLSEVERLHPGTVRVIL--SGYAEESSLFRSVGPAHQYLSKPCDPEAILALMARSWRLRE 123
           LL ++  L P T+R+ L  +   + +   R +G AH++L  P  PE +L  +     LR+
Sbjct: 61  LLGQIRTLRPDTIRIALIDAQDGQRTPPARIIGVAHRFLPMPLAPEVLLEAVTSLEELRD 120

Query: 124 ILADPALRDLAASLRTLPSPPDLYLRLTAAM-ADPAVNTSTIARMIAEDMAMTAELLKIT 182
           +L++P LR     +  LPSPP LYL L  A+  D   + + IA++IA D A+ A++L++ 
Sbjct: 121 LLSNPRLRAAIGRIEKLPSPPHLYLSLMHALEEDDGADAADIAKLIAGDPAIAAKVLQLC 180

Query: 183 NSSYFALPSRITTAAQAVRLLGLETVCVLVLHAGIFRQFQGHPGLGEILRALSGHGVAKG 242
           NS++F+    IT    AV  LG+ T+  LVL + +F      P     ++        + 
Sbjct: 181 NSAFFSGGRSITDLRTAVTRLGVATLRDLVLASEVFSVQTLSPAERAAMQ-------RRA 233

Query: 243 LLAQKLAAEDGADEAVRAQAHCAGMMADIGALVLLDAYPDAFQTMIAKAGRGKLEAVERA 302
           LL+ +LAA+     +       A ++ADIG  +LL    D  +  +        E  ER 
Sbjct: 234 LLSSRLAAKVLPPTSAEL-GSTAALLADIG--LLLPGVRDEREPPV--------EGDER- 281

Query: 303 AFGASHAQLGAFILGLWGFPDPVIEAVLYQWHPSQCLNQGRGALSYVHLA 352
                H + GA++LGLWG P P+IEAV +  HP +   +       VH+A
Sbjct: 282 ---LGHTEAGAYLLGLWGLPMPIIEAVAFHRHPQRSSLRSFWVTGAVHVA 328