Pairwise Alignments

Query, 388 a.a., Predicted signal transduction protein (NCBI) from Rhodospirillum rubrum S1H

Subject, 280 a.a., HD domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 80.9 bits (198), Expect = 4e-20
 Identities = 69/230 (30%), Positives = 112/230 (48%), Gaps = 34/230 (14%)

Query: 134 AASLRTLPSPPDLYLRLTAAMADPAVNTSTIARMIAEDMAMTAELLKITNSSYFALPSRI 193
           A SL TLP+  D   RL   + DP  +T  IA++IA D  ++A++LK+ NS  +  P RI
Sbjct: 17  AQSLPTLPAVLDEVTRL---VEDPGSSTEQIAKVIAYDQVLSAKVLKMVNSPIYGFPGRI 73

Query: 194 TTAAQAVRLLGLETVCVLVLHAGIFRQFQGHPGLGEILRALSG---HGV----AKGLLAQ 246
            +   A+ LLG   V  L++   +F          ++ RA++G   H V    A G LA+
Sbjct: 74  GSVQHALVLLGYNVVRGLIVSTAVF---------DDMSRAMTGLWDHSVGCSLACGELAR 124

Query: 247 KLAAEDGADEAVRAQAHCAGMMADIGALVLLDAYPDAFQTMIAKAGRGKL--EAVERAAF 304
            LA +D  + AV      AG++ D+G +V     PDA + + A      +     E+   
Sbjct: 125 TLALKDPEEYAV------AGLLHDLGKVVTAVQLPDARKELDALVSAEDITYREAEKRVL 178

Query: 305 GASHAQLGAFILGLWGFPDPVIEAVLYQWHPSQCLNQGRGALSYVHLACV 354
           G +H ++ A++   W  P  + E +   WH     ++  GA ++  +ACV
Sbjct: 179 GFAHDRINAWVGERWNLPAALREGM--AWH-----HRPMGAPNFRTMACV 221