Pairwise Alignments

Query, 388 a.a., Predicted signal transduction protein (NCBI) from Rhodospirillum rubrum S1H

Subject, 274 a.a., putative signal transduction protein (RefSeq) from Shewanella sp. ANA-3

 Score = 63.9 bits (154), Expect = 5e-15
 Identities = 48/204 (23%), Positives = 88/204 (43%), Gaps = 6/204 (2%)

Query: 133 LAASLRTLPSPPDLYLRLTAAMADPAVNTSTIARMIAEDMAMTAELLKITNSSYFALPSR 192
           L + +  LP  P     L   + D       IA  ++ D  ++A++L++ N +++     
Sbjct: 6   LLSRVDDLPRLPKAISELLEVVNDDNATVKNIATKVSHDPLISAKVLRLANCAHYGHSRE 65

Query: 193 ITTAAQAVRLLGLETVCVLVLHAGIFRQFQGHPGLGEILRALSGHGVAKGLLAQKLAAED 252
           + +  +AV  LG++T+  LVL + +        G+   L    G      L  Q++A   
Sbjct: 66  VGSIDEAVVRLGMQTLRTLVLASAVMGSVPKCQGVD--LAQFWGQTFEIALYCQEMAKRC 123

Query: 253 GADEAVRAQAHCAGMMADIGALVLLDAYPDAFQTMIAKAGRGK-LEAVERAAFGASHAQL 311
           G       +A   G++  IG L++    P+  + +     +GK   A ER   G     +
Sbjct: 124 GVQP---DEAFTCGILHRIGDLLIAAISPEDAEKITEAVAQGKDKHAFERELLGYDSPDI 180

Query: 312 GAFILGLWGFPDPVIEAVLYQWHP 335
           GA +   W F   +++ +LYQ HP
Sbjct: 181 GALLAKNWKFTPALVQGILYQDHP 204