Pairwise Alignments

Query, 463 a.a., Multi antimicrobial extrusion protein MatE (NCBI) from Rhodospirillum rubrum S1H

Subject, 460 a.a., MATE family efflux transporter from Methanococcus maripaludis S2

 Score =  121 bits (304), Expect = 4e-32
 Identities = 103/436 (23%), Positives = 198/436 (45%), Gaps = 20/436 (4%)

Query: 20  RLFVSNALPMAVVMSMGGVLNVVDGIFVGHFIGSDALAAVSLAFPVAMVLSALTTLTGGG 79
           +  V  +LPM + MS   + NV+D I+V   +GSDALAA+ L FP    + A++   G G
Sbjct: 16  KAIVKISLPMVIAMSFQSLYNVIDAIWVAG-LGSDALAAIGLFFPFMFAIMAISNGVGIG 74

Query: 80  MSSLMARYLGAGDRGAAGRIFAETHGLVLAISVGLVVLWAVVGAALVDSMAAGNPKVAGL 139
            SS ++R +G  ++ AA  I    H +VL I +G++++  +     + S+   +     +
Sbjct: 75  GSSAISRRIGQNNKDAADNI--AVHSIVLGIIIGILLIGVIPFLGAIFSLIGASGITVTM 132

Query: 140 AQDYLQIMILGAPAQLMLGVHADALRNEGRAGLIAALSVLVNLFNIGANGLGIVVLGLGI 199
           A +Y  I+  GA   L   +    LR EG         +L ++ NI  + + I VL +G+
Sbjct: 133 AVEYSTILFGGAVVLLFTNIANAILRGEGDTKRAMYAIILGSVLNIVLDPIFIYVLNMGV 192

Query: 200 SGSALGTVAAQAL-GLALVIGVRGHSKGLLPLSVLRARNWLGAWSQIIRLGLPLCLSFIG 258
           +G+A  T+ +  + G+  V  +       L +S  + +  +    +I  +GLP  +S + 
Sbjct: 193 AGAAWATLLSLVITGILFVYWLFIKKDTFLKISFEKFKLDINIIKEIFSIGLPASISHLT 252

Query: 259 IAMVASVVIVSLRLSAGTDYNALVAAYGVVTRLLGFAFLPQMAIALATQSITGNNAGAGR 318
           +A    ++   +  + G D    +A +    R++    +P + +A     +TG   G+  
Sbjct: 253 MAFSMFLLTAIVAKAGGNDG---IAVFSTGWRIVSMGTIPLVGLATGVTVVTGAAYGSAN 309

Query: 319 TDRARAALRLALGAAFL-WCLPVVLAGVFAG--TTLGSWFSDDPAVIDAVAEILRPMMLF 375
            ++   + + AL    L   +   L  +F    T L ++  +   +++ +   L+ M LF
Sbjct: 310 PEKLEISYKYALKMGILVETIIAALILIFENQITYLFTYSENSVHILEGLLVFLKYMFLF 369

Query: 376 YAASGPVLVLALYVHALGQPGRTAALTLVKPWLLTPLLILALSIGFGV------SEMWLA 429
           Y    P L L +   A+ Q       +L    L T +L + ++  FG+      + +W  
Sbjct: 370 Y----PTLPLGMLTAAMFQGVSKGNNSLFISLLRTIILQIPMAYTFGIIFNQGLTGVWFG 425

Query: 430 FPMADAIILMLAVMIG 445
             +   I + +A ++G
Sbjct: 426 MILGHVIAVSIAYLLG 441