Pairwise Alignments

Query, 625 a.a., Periplasmic Sensor Signal Transduction Histidine Kinase (NCBI) from Rhodospirillum rubrum S1H

Subject, 597 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

 Score =  102 bits (254), Expect = 5e-26
 Identities = 119/467 (25%), Positives = 202/467 (43%), Gaps = 69/467 (14%)

Query: 170 VIAVVAGGIDSNAAVNVWRALDAF------------ADQRIWMLRADRGVQNIHPISAAD 217
           ++ V+   +D +A    W++  ++            + Q  W+  +   V ++ P    D
Sbjct: 168 ILGVIVVKMDLSAIEQGWQSKSSYFVATDDHQVVFMSSQPAWLFHS---VADLSPAQLND 224

Query: 218 MRRLE---GTVLPALAGGFPPQ----EGPAPLIDWPILEDEIAVTLPFPALSGTI-VASM 269
           +R+ +    + +P+L      Q    E   P   W + +D I  + P P L+ TI V S 
Sbjct: 225 IRQSQQYLDSPIPSLGWQGDLQAEQSEWRKPEKHW-LQDDYIVSSRPLPELALTIRVLSP 283

Query: 270 KKSLLVKTWVHRMATGGLGFVFLCVVTAVVFRLAQ-------RSQAVADARREAAEHTLF 322
           K  L    +       GL  + LC++ A+V+   Q       R + +   ++E  +   F
Sbjct: 284 KIELFWSAF-------GL-VIILCMLFAIVYLGFQLWHHRQLRQRQIEQLQQETKQKLEF 335

Query: 323 ESRENYRLLYENVETLVRDRTAELAALVDTLTRTQAELVRSEKLASLGAMVAAVAHEVNT 382
           E  E    L+  +   ++   A        L +TQ EL+++ KLA LG M A+++HE+N 
Sbjct: 336 EVMERTAKLHAEIAERIKTEHA--------LRQTQDELIQAAKLAVLGQMSASISHELNN 387

Query: 383 PVGNALVAATTLKDHTRAFATLTASGRISRQAIAAYVATTEEACDLLVRSLEQAGRLVGT 442
           P    L A  +  D+ R F       R             EE    +    E+  ++   
Sbjct: 388 P----LAAIRSFADNGRRFLATNKPER------------AEENLSRISALTERMAKISEQ 431

Query: 443 FKQVAVDQTNDQRRSFLLDQTIQEVITALKPSFRYRPITVSL-DLAAAVTMDSFPGSLAQ 501
            K  A   T+++++   L   I      +   F+ +   + L DL   V +   P  L Q
Sbjct: 432 LKSFARKSTSNEQQDVQLYPLILSAKELMTGQFKAQMTLLELCDLETPVWVRVNPIQLEQ 491

Query: 502 VIGNLVTNAVVHGFDDHDSGEIRIITRSVEAQSVTIGVSDNGRGIAPAILPKIFDPFFTT 561
           V+ NL+TNA +   +      ++I  ++ E Q + + V DNG G+    LP +F+PF TT
Sbjct: 492 VLINLLTNA-LQALEGQAERVVQIRLQTSE-QQIALFVDDNGPGVGIETLPHLFEPFHTT 549

Query: 562 RLGQGGSGLGLHIVYGIVTKILGGGLTVDSVEGEGTRFTLTLPRVAP 608
           +  + G GLGL I   I+   + G L+V +    G RFT+TLPR  P
Sbjct: 550 K--KNGLGLGLSISQQILHS-MQGTLSVATSPLGGARFTITLPRFTP 593