Pairwise Alignments

Query, 450 a.a., Putative diguanylate cyclase (GGDEF domain) with PAS/PAC sensor domain (NCBI) from Rhodospirillum rubrum S1H

Subject, 586 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Pseudomonas fluorescens FW300-N2E2

 Score =  135 bits (339), Expect = 5e-36
 Identities = 103/300 (34%), Positives = 153/300 (51%), Gaps = 38/300 (12%)

Query: 160 FNASQRFGRIGVWDWNTETNEVFWSEEVFPMFGFTPAEITPT-YDLFIAMVHPDDFVALT 218
           F+ +   GRI      T  N+ F S     +FG+   E+    + L  +  HPD+F +  
Sbjct: 19  FSETDLSGRI------TYVNDQFCS-----LFGYRRDELLGVNHRLLNSGQHPDEFFS-- 65

Query: 219 DSERACLSGTTLHDQEYRVIWR--------DGSVHWIRET-ADVLRESDGTPRRMVGVIR 269
                    +  H      +W+        DG+++W+  T   V+ +  G   R + +  
Sbjct: 66  ---------SMWHTIALGQVWKGEICNRAKDGTLYWVDTTLVPVIDDDTGQVERYLAIRF 116

Query: 270 EVTEEKEAQRQALRIAMLDPLTGLPNRATFLERLEADLGQVDETGVA--VPLALAFIDLD 327
           +V+E++            D LTGLPNR T+L  L   L Q  E   A  +PLA+  +DLD
Sbjct: 117 DVSEKRRLLHSLQWRVGHDVLTGLPNR-TYLSDL---LDQALEFSRAENLPLAVCMLDLD 172

Query: 328 DFKPINDTYGHLMGDRVLMTIAKRLSEAVRPQDMVARVGGDEFVALLRGCRDGARARTVA 387
            FK +ND YGH  GDR+L+ +A+RL   VR +D+VAR+GGDEFV +LR  R         
Sbjct: 173 GFKAVNDGYGHASGDRLLVEVARRLRSIVRGEDVVARLGGDEFVLVLRHVRGMDELHAAL 232

Query: 388 ARLLDAVTAPVSIDTVIHRVRASIGISLYPSLVSTGDDLIATADQAMYVAKRAGGDPIRL 447
           +R+L AV+ P  ID    +V ASIG++L+P      + L+  ADQAMYVAK++G +   L
Sbjct: 233 SRVLIAVSMPYGIDGKGIKVFASIGVTLFPWDNEDAETLLRHADQAMYVAKQSGRNRFHL 292