Pairwise Alignments

Query, 450 a.a., Putative diguanylate cyclase (GGDEF domain) with PAS/PAC sensor domain (NCBI) from Rhodospirillum rubrum S1H

Subject, 651 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  138 bits (348), Expect = 5e-37
 Identities = 91/234 (38%), Positives = 122/234 (52%), Gaps = 20/234 (8%)

Query: 235 YRVIWRD--GSVHWIRE---------------TADVLRESDGTPRRMVGVIREVTEEKEA 277
           YR +WRD   S HW  E               T   +R+    P   VGV  +++  + +
Sbjct: 148 YRQLWRDLLESGHWQGEIWNRRKNGETYPQWLTISTVRDEAHQPVSYVGVFLDLSPIRRS 207

Query: 278 QRQALRIAMLDPLTGLPNRATFLERLEADLGQVDETGVAVPLALAFIDLDDFKPINDTYG 337
           +++ L +A  DPLT LPNR  FL RLE  L      G +   A+ F+DLD FK +ND+ G
Sbjct: 208 EQKLLHLAHHDPLTDLPNRTLFLARLEHALSLSAREGGSG--AVLFLDLDRFKDVNDSLG 265

Query: 338 HLMGDRVLMTIAKRLSEAVRPQDMVARVGGDEFVALLRGCRDGARARTVAARLLDAVTAP 397
           H  GDR+L  +A+RL   +R  D +AR+GGDEF+ LL       RA  VA +LL+ + AP
Sbjct: 266 HPTGDRLLCAVAERLRPCLRESDTLARLGGDEFLLLLETAATPERAAVVAEKLLEQLAAP 325

Query: 398 VSIDTVIH-RVRASIGISLYPSLVSTGDDLIATADQAMYVAKRAGGDPIRLHGE 450
             +D      V ASIGI LYP+       LI  AD A+Y AK AG    R + E
Sbjct: 326 FRLDDRSEVYVGASIGICLYPADGDNATTLIQHADSALYQAKAAGRHTFRFYSE 379