Pairwise Alignments

Query, 326 a.a., TRAP transporter solute receptor, TAXI family (NCBI) from Rhodospirillum rubrum S1H

Subject, 335 a.a., C4-dicarboxylate ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score = 84.0 bits (206), Expect = 5e-21
 Identities = 78/321 (24%), Positives = 133/321 (41%), Gaps = 8/321 (2%)

Query: 12  TVAAMPAGFGG-GAALAADPRIVTIGTGGVTGVYYPAGGAICRMVN-KHRAEHGIRCAVE 69
           T+ A    FG  G A AA+ R   + T    G YYP G A+  +   K    +    +  
Sbjct: 9   TLLAAITSFGLIGGAYAAEERSYILATASTGGTYYPVGVALATLTKVKLTPSYHFSLSAI 68

Query: 70  ATDGSVENLESLRAGDLDLGIAQADWVHHAWEGGAKYQNRAAFAGLRTLLELHAESFTVV 129
           ++ GS EN++ +   +    I Q  +   AW G   Y  R       ++L  + E F V 
Sbjct: 69  SSAGSGENVKLMNDNEAQFAILQGLYGAWAWAGEGPYAERQNQLRSVSMLWQNVEHFIVR 128

Query: 130 ARKA-TG-IRTFDDLKGRRVSLGITGSGQRATAEVLLAAMDWTLKDFSAVPEVKPAEQSA 187
           +  A TG I     +KG++ S+G   SG   +   ++  +      F+ +  +     ++
Sbjct: 129 SDLAPTGTIADLASMKGKKFSIGSKNSGTEFSGRQIMKGVGVDPDTFN-LAYLGYGGSAS 187

Query: 188 ALCDDRVDAIIYVVGHPNGAIIEATTSC--DAGFVAVDNAGTASLIAENPFYAKTVIPAK 245
           AL +  +D +    G P GA+ +A  +   D   ++  +            + K  IPA 
Sbjct: 188 ALQNGTIDGMNTPAGVPVGAVTQAFAAMGNDIKILSFTDEQIKQANGNYNLWTKFDIPAN 247

Query: 246 LYRGNPADTPTFGVHATLVATAALPDDVAYALVKAVMENFDDFRKLHPAFAGLVRESMVP 305
            Y G      T      L     + ++  Y L KA+ EN    + +H A   +  E  + 
Sbjct: 248 TYPGVDKTITTIAQPNFLAVRTDISEEDVYQLTKAMYENLAFLQGIHKATKDMAIEKAIE 307

Query: 306 AQSTVPVHPGALRYFQEIGLR 326
               +P+H GA RY+QE+G++
Sbjct: 308 GLP-MPLHAGAARYYQEVGIK 327