Pairwise Alignments

Query, 326 a.a., TRAP transporter solute receptor, TAXI family (NCBI) from Rhodospirillum rubrum S1H

Subject, 328 a.a., C4-dicarboxylate ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  318 bits (816), Expect = 9e-92
 Identities = 151/312 (48%), Positives = 209/312 (66%), Gaps = 2/312 (0%)

Query: 14  AAMPAGFGGGAALAADPRIVTIGTGGVTGVYYPAGGAICRMVNKHRAEHGIRCAVEATDG 73
           A   A  G G A A D   +TIGTG VTGVYYP GGAIC++VNK R +H IRC+VE+T G
Sbjct: 17  AIAAAVIGSGVASAQD--FITIGTGSVTGVYYPTGGAICKLVNKDRKDHNIRCSVESTGG 74

Query: 74  SVENLESLRAGDLDLGIAQADWVHHAWEGGAKYQNRAAFAGLRTLLELHAESFTVVARKA 133
           S+ N+ ++R+G+LD GI Q+DW +H + G +++  +  +  LR +  +H E F ++AR  
Sbjct: 75  SIYNVNTIRSGELDFGIVQSDWQYHGYNGTSEFAEQGPYKKLRAVFSMHTEPFNIIARAD 134

Query: 134 TGIRTFDDLKGRRVSLGITGSGQRATAEVLLAAMDWTLKDFSAVPEVKPAEQSAALCDDR 193
           +GI    DL G+RV++G  GSG RAT +V++ A  W    F    E+K +E+S ALCD++
Sbjct: 135 SGIENVKDLAGKRVNIGNPGSGDRATMQVVMDAFGWNNDSFKLAAELKGSERSQALCDNK 194

Query: 194 VDAIIYVVGHPNGAIIEATTSCDAGFVAVDNAGTASLIAENPFYAKTVIPAKLYRGNPAD 253
           +DA IY+VGHPNGAI EATTSC A  V         ++A NP+YA +V+PA +Y G   +
Sbjct: 195 IDAFIYMVGHPNGAIKEATTSCAAKLVPATGPEIEKIVANNPYYAYSVVPAGMYSGTDQE 254

Query: 254 TPTFGVHATLVATAALPDDVAYALVKAVMENFDDFRKLHPAFAGLVRESMVPAQSTVPVH 313
             +FGV ATLV T  + + V Y L KAV ENFD F +LHPAFA L +E MV A +++P+H
Sbjct: 255 VKSFGVAATLVTTEEVSEAVVYNLTKAVFENFDTFTRLHPAFANLKKEDMVTAGNSIPLH 314

Query: 314 PGALRYFQEIGL 325
           PGA++Y++E GL
Sbjct: 315 PGAVKYYKEAGL 326