Pairwise Alignments

Query, 330 a.a., Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like (NCBI) from Rhodospirillum rubrum S1H

Subject, 330 a.a., dipeptide transport ATP-binding protein DppD from Phaeobacter inhibens DSM 17395

 Score =  283 bits (725), Expect = 3e-81
 Identities = 147/301 (48%), Positives = 198/301 (65%), Gaps = 2/301 (0%)

Query: 8   ILEVTHLDTRFSTPDGEVKAVNDLSFTLNRGETLAVVGESGSGKTQIFLSLMGLLARNGQ 67
           +L V  L  +F+  D  V A+N +SF L +GE L +VGESG+GK+    SLM LL+R G 
Sbjct: 3   LLSVRDLTVKFAMRDHTVTALNQISFDLGKGERLGIVGESGAGKSITGFSLMNLLSRPGF 62

Query: 68  V-SGRALFCGQDLLKLSRRELNAIRGSRMAMIFQDPMTALNPFLTVERQMTEVLIEHKGL 126
           + SG+ LF  +D++KLS  E+  IRG+RMAMIFQDPM  LNP LT+ +QM E L  H+ L
Sbjct: 63  IDSGQILFGDKDIVKLSDAEMRKIRGNRMAMIFQDPMVTLNPVLTIGQQMVETLKAHRSL 122

Query: 127 GRAEARAHSIGMLEKVGIPEAARRIGLYPHEFSGGMRQRVMIAIALLCSPEVLIADEPTT 186
            +AEA   +I  L +V IP    R+  YPHE SGGMRQR++IA+ALL  PE++IADEPTT
Sbjct: 123 SKAEAEQIAILKLREVYIPSPEERLNQYPHELSGGMRQRIIIAMALLLDPELIIADEPTT 182

Query: 187 ALDVTVQAQILALLNTLKAEIDTAIVLITHDLGVVAGLADRVLVLYGGRIAETGTVDQVF 246
           ALDVT+QA I+ LL  L       ++LITHDLGVV+ + +R LV+Y GR+ E G   ++ 
Sbjct: 183 ALDVTIQADIMELLLELCQSNKVGLILITHDLGVVSQMTERTLVMYAGRLIEAGPTREII 242

Query: 247 YDARHPYTHGLLRSMPRLDGVPGETLYAIPGQPPNLQNLPAGCAFQDRCSNRMAQCAEAP 306
            D +HPYT GL+ ++P+   +PG+ L  IPG  P L ++P GC F  RC   +  C +  
Sbjct: 243 NDPQHPYTQGLINALPQ-QTLPGQRLKQIPGNMPGLASIPPGCPFSPRCEYAVDHCRKVL 301

Query: 307 P 307
           P
Sbjct: 302 P 302