Pairwise Alignments

Query, 548 a.a., Chaperonin Cpn60/TCP-1 (NCBI) from Rhodospirillum rubrum S1H

Subject, 543 a.a., TCP-1/cpn60 chaperonin family protein from Methanococcus maripaludis S2

 Score =  130 bits (328), Expect = 1e-34
 Identities = 140/555 (25%), Positives = 241/555 (43%), Gaps = 76/555 (13%)

Query: 22  ILANAVKVTLGPKGRNVVLDKSYGAPRITKDGVSVAKEIELKDKFENMGAQMVKEVASKS 81
           I+A  V+ TLGPKG + +L    G   +T DGV++ +E+ +    E+  A+M+ EVA   
Sbjct: 30  IIAETVRSTLGPKGMDKMLVDDLGDVVVTNDGVTILREMSV----EHPAAKMLIEVAKTQ 85

Query: 82  ADVAGDGTTTATVLAQAIVREGVKSVAAGMNPMDLKRGIDLAVLAVVE-------DVKKR 134
               GDGTTTA V+A  ++R+  + +   ++P  + +G   A     E       +V  +
Sbjct: 86  EKEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAAAQKAQELLKTIACEVGAQ 145

Query: 135 SKKIKTSAEVAQV-GTISANGDEEVGKIIATAMEKV-GNEG-----VITVEEAKGL---D 184
            K+I T   +  + G  +    E++ +II  A+  V  +EG     +I +E+  G    D
Sbjct: 146 DKEILTKIAMTSITGKGAEKAKEKLAEIIVEAVSAVVDDEGKVDKDLIKIEKKSGASIDD 205

Query: 185 TELDVVEGMQFDRGYLSPYFVTNAEKMVADLENPYILLHEKKLSG---LQALLPVLEAVV 241
           TEL  ++G+  D+  +S             L N  I + E +      +     ++E + 
Sbjct: 206 TEL--IKGVLVDKERVSAQMPKKVTDAKIALLNCAIEIKETETDAEIRITDPAKLMEFIE 263

Query: 242 QSSRPLLIIAEDVEGEALATLVVNKLRGGLKVAAVKAPGFGDRR---KAMLEDIAILTGG 298
           Q  + L  +  +++      L   K    L    +   G    R   K+ +E +A  TG 
Sbjct: 264 QEEKMLKDMVAEIKASGANVLFCQKGIDDLAQHYLAKEGIVAARRVKKSDMEKLAKATGA 323

Query: 299 QVISEDLGIKLENVTIDMLGTAKKVTITKEETTLVDGAGDKKDIEARCSQIRANIEDTSS 358
            VI+      +++++   LG A  V    EE  +   +GD       C   +A       
Sbjct: 324 NVITN-----IKDLSAQDLGDAGLV----EERKI---SGDSMIFVEECKHPKA------- 364

Query: 359 DYDREKLQERLAKLAGGVAVIKVGGATETEVKEKKDRVDDAMHATRAAVEEG-VVAGGGV 417
                               + + G TE  ++E    VDDA+      +E+G +V+GGG 
Sbjct: 365 ------------------VTMLIRGTTEHVIEEVARAVDDAVGVVGCTIEDGRIVSGGGS 406

Query: 418 ALLHAIRSL-DSVKGANPDQNVGIEIVRRALQAPVRQIAENAGVDGAVVAGKL----LEN 472
             +     L +  +G +  + + +     AL+   R +AENAG+D   +  K+      N
Sbjct: 407 TEVELSMKLREYAEGISGREQLAVRAFADALEVIPRTLAENAGLDAIEILVKVRAAHASN 466

Query: 473 SDTDFGYNAQTGIYENLVTAGVIDPTKVVRAALQGAASIAGLLITTEAMVAEIPEKKDAM 532
            +   G N  TG  E++   GV++P +V   A+Q AA    +L+  + ++A     +   
Sbjct: 467 GNKCAGLNVFTGAVEDMCENGVVEPLRVKTQAIQSAAESTEMLLRIDDVIA----AEKLR 522

Query: 533 PSPDMGGMGGMGGMG 547
            +PDMG MGGM GMG
Sbjct: 523 GAPDMGDMGGMPGMG 537