Pairwise Alignments

Query, 445 a.a., Two Component, Sigma54 Specific, Transcriptional Regulator, Fis family (NCBI) from Rhodospirillum rubrum S1H

Subject, 478 a.a., nitrogen regulation protein NR(I) from Pseudomonas stutzeri RCH2

 Score =  261 bits (667), Expect = 3e-74
 Identities = 160/413 (38%), Positives = 233/413 (56%), Gaps = 33/413 (7%)

Query: 47  DLVMIDVR---LDVNRLMVGMTEERMATPVVAYGVGTDTQAAVRAIKAGAREYIPLPPDP 103
           D+++ D+R   L    ++  + E+    PV+     +D  +AV + + GA EY+P P D 
Sbjct: 50  DVIISDIRMPGLSGLDMLSQIREQYPRLPVIIMTAHSDLDSAVASYQGGAFEYLPKPFDV 109

Query: 104 ELIAAVLEAVTEESHA---------------LVYKDPAMGALVRMAEQIAPSDASVLIVG 148
           +   ++++   + +                 ++ + PAM  + R   +++ S+ +VLI G
Sbjct: 110 DDAVSLVKRANQHAQEQQNQQEPANRHHTPEIIGEAPAMQEVFRAIGRLSHSNITVLING 169

Query: 149 ESGTGKEIIARHIHRKSRRAQGRFIAVNCAAIPEALLESELFGHEKGAFTGAVARRLGKF 208
           ESGTGKE++A  +HR S R+   FIA+N AAIP+ L+ESELFGHEKGAFTGA  +R G+F
Sbjct: 170 ESGTGKELVAHALHRHSPRSASPFIALNMAAIPKDLMESELFGHEKGAFTGAANQRRGRF 229

Query: 209 EEANGGTLLLDEISEMDVRLQAKLLRVLQEREIDRVGGRQPIKVDVRILATSNRDMEAEV 268
           E+A+GGTL LDEI +M    Q +LLRVL + E  RVGG  P++VDVRI+A +++D+E  V
Sbjct: 230 EQADGGTLFLDEIGDMPADTQTRLLRVLADGEFYRVGGHTPVRVDVRIIAATHQDLETLV 289

Query: 269 RAGHFREDLFFRLNVITLALPPLRKRPADIDLLADHFARKFADLNGVPYRPLADETRQSL 328
           +AG FREDLF RLNVI + +P L  R  DI  LA+HF    A    V  + L  ET++ L
Sbjct: 290 QAGKFREDLFHRLNVIRIHIPRLSDRREDIPALAEHFLASAAQELSVETKVLKPETKEYL 349

Query: 329 RGHSWRGNVRELENTLHRAVLLSSGPRI----LPEAILLTGGDTANAPAGESTL------ 378
           +   W GNVR+LENT     +++SG  +    LP  +L    +   A   E  L      
Sbjct: 350 QHLPWPGNVRQLENTCRWITVMASGREVHVDDLPPELLNQQAEAQPAHNWEQALRNWSDQ 409

Query: 379 -----TGSLVGRTVADVERDLIIDTLRHTLGNRTHAATILGISIRTLRNKLKQ 426
                  +L+   V   ER +I   L+HT G R  AA +LG    TL  K+K+
Sbjct: 410 ALARGQSNLLDEAVPAFERIMIETALKHTAGRRRDAALLLGWGRNTLTRKIKE 462