Pairwise Alignments

Query, 720 a.a., Flagellar biosynthesis protein FlhA (NCBI) from Rhodospirillum rubrum S1H

Subject, 697 a.a., flagellar biosynthesis protein FlhA from Vibrio cholerae E7946 ATCC 55056

 Score =  534 bits (1375), Expect = e-156
 Identities = 281/674 (41%), Positives = 434/674 (64%), Gaps = 14/674 (2%)

Query: 48  PFGLIAILVVLILPMPTWLLDIMLAMSLTLSVLILMTVVFIRKALEFSTFPMVLLITTML 107
           P  ++A L +++LPMP +LLD+    ++ LS+++L+  V+ R+ L+F+ FP VLLI T+L
Sbjct: 25  PVMVLAALAMVVLPMPAFLLDLFFTFNIALSLVVLLVTVYTRRPLDFAAFPTVLLIATLL 84

Query: 108 RLALNLASTRLILAQGHEGTAAAGHVIEAFGGFIMGGNFVIGVIVFSILVLVNFMVITKG 167
           RLALN+ASTR++L  GHEG  AAG+VIEAFG  ++GGN+ +G++VF IL+++NFMV+TKG
Sbjct: 85  RLALNVASTRVVLLYGHEGPGAAGNVIEAFGNVVIGGNYAVGLVVFLILMIINFMVVTKG 144

Query: 168 ATRIAEVTARFTLDAMPGKQMAIDADLSSGLIDETEARRRREEMQKESDFFGAMDGASKF 227
           A RI+EV+ARFTLDA+PGKQMAIDADL++GLID+ +AR RR E+ KE+DF+G+MDGASKF
Sbjct: 145 AGRISEVSARFTLDALPGKQMAIDADLNAGLIDQEQARVRRFEVTKEADFYGSMDGASKF 204

Query: 228 VRGDAIAGIIITFINVIGGMIIGIAQNDLTFSEAANTYTALTVGDGLVSQIPALIISVAA 287
           V+GDAIAGI+I FIN+IGG+ IG+ Q DL F EA   YT LT+GDGLV+QIP+L++S+ A
Sbjct: 205 VKGDAIAGILILFINIIGGLSIGMIQYDLGFKEAIEIYTLLTIGDGLVAQIPSLLLSIGA 264

Query: 288 GVMVSKGGLTTTAETALIGQFTAYPKALGMSAFLAGALALVPGTPALPFLLLAGLTGGAA 347
            +MV++          +I Q    PKAL ++A +   + +VPG P   FL LA L  GAA
Sbjct: 265 AIMVTRQNTDEDMGQQVIFQLFDNPKALTITAGILFVMGIVPGMPHFAFLFLALLASGAA 324

Query: 348 WWLNRKASNIKRDEAEHAQELATQEIPVAEEPISTALK------IDLVRLELGYGLLSLI 401
           +WL+RK    ++ +AE+    A  ++   E P    L       +D++ LE+GY L+ L+
Sbjct: 325 YWLHRK----QKTKAENKNLPAKSDV---ETPTQRELSWDDVQPVDVIGLEVGYRLIPLV 377

Query: 402 NTAHNQRLTDQIKALRRALATDMGFVMPPVRIQDNMQLAANTYRIYIKEVEAGHGDLRPT 461
           +      L +++K +R+ L+ D GF++PPV I+DN++L  N+YRI +  V  G  ++RP 
Sbjct: 378 DKDQGGELLERVKGVRKKLSQDFGFLIPPVHIRDNLELTPNSYRITLMGVAVGEAEIRPD 437

Query: 462 MLLVMDPRGDEITLAGEKTHEPTFGLPAVWVDLSNREEAMFRGYTVVDPPTVITTHITEV 521
             L ++P      + GE+T +P FGL AVW+    RE A   GYTVVD  TV+ TH++++
Sbjct: 438 QELAINPGQVYGMIDGERTRDPAFGLDAVWIREDQREHAQALGYTVVDSSTVLATHLSQL 497

Query: 522 VKDHMAELLSYAETQKLLDDLDKEQQKLIADMIPTQISTSGVQRVLQNLLAERVSIRDLP 581
           + ++ A+L+ + E Q LL+ L +   KL+ + +P Q+S   V +VLQNLL E + IRD+ 
Sbjct: 498 LTNNAAQLIGHEEVQNLLEMLSRSAPKLVENFVPDQLSLGVVVKVLQNLLHEAIPIRDIR 557

Query: 582 TILEGVAEACGATRNIMMITEHVRTRIARQLSDANVNEDGIVPLVTLSPQWETAFAEALI 641
           TI++ ++E    ++   ++T  VR  + R +       +  +P++TL P+ E    + + 
Sbjct: 558 TIVQTLSEYASKSQEPDILTAAVRISLKRLIVQEINGVEPELPVITLIPELEQILHQTMQ 617

Query: 642 GQGEDRQLSMAPSKLQEFIVGVRQTFERFAMQGESPVLLTSPMIRPYVRSIIERFRPMTV 701
             G +    + P   +   + +    +   ++GE  VLLTS ++R  +   ++   P   
Sbjct: 618 ASGGE-SAGIEPGLAERLQMALSHATQEQELKGEPAVLLTSGVLRSTLAKFVKNTIPNLR 676

Query: 702 VMSQNEIHPKAKIK 715
           V+S  EI  + +I+
Sbjct: 677 VLSYQEIPDEKQIR 690