Pairwise Alignments

Query, 942 a.a., CheA Signal Transduction Histidine Kinases (STHK) (NCBI) from Rhodospirillum rubrum S1H

Subject, 752 a.a., Signal transduction histidine kinase CheA (EC 2.7.3.-) from Pseudomonas fluorescens FW300-N2E2

 Score =  310 bits (793), Expect = 3e-88
 Identities = 188/516 (36%), Positives = 287/516 (55%), Gaps = 32/516 (6%)

Query: 122 FAEGKQPSVAAMAPAPARAAGSGPAISEGGYPVAA--ELLAEVSEAVAKGKRAATEAELA 179
           FA     S  A  P PA+     PA +  G  + +  E  + + E   KGK +      A
Sbjct: 254 FAVDALDSAIASVPTPAK-----PAAATAGSDLISDHEFESLLDELHGKGKFSEVGTASA 308

Query: 180 AELAAELAAAEKAEQAVAAPVPEVIPEVKAATPVVQPAKPPAVTAAHDTNGPNGGGGGEQ 239
           A  AA  AAA  A+   AAP P      KA  P  +PAKP A   A             +
Sbjct: 309 APAAAAAAAAPAAK---AAPKPAA----KAPEPKAEPAKPAAAAPAP---ARAAAAAPAE 358

Query: 240 KEGSVASQSIRVNVELLENLMTLVSELVLTRNQLLQMVRGSDDSEFVAPLQRLSHITTDL 299
           K  S A  ++RV+   L+ +M +V ELVL RN+L+++   S D      +  L  +T DL
Sbjct: 359 KPASEAETTVRVDTARLDEIMNMVGELVLVRNRLVRLGLNSQDEAMSKAVSNLDVVTADL 418

Query: 300 QEGVMKTRMQPIGNAWAKLPRIVRDLSIEMHKKIDLQMYGADTELDRQVLEMIKDPLTHM 359
           Q  VMKTRMQPI   + + PR+VRDL+ ++ K+I+L++ G +T+LD+ ++E + DPL H+
Sbjct: 419 QTAVMKTRMQPIKKVFGRFPRLVRDLARQLKKEINLELVGEETDLDKNLVEALADPLVHL 478

Query: 360 VRNSGDHGLEFPDERAAAGKPETGVIKLNAYHEGGHIIIEISDDGRGLNLERIRAKALSN 419
           VRN+ DHG+E P+ER A+GK  +G + L A  EG HI++ ISDDG+G++   +R+ A+  
Sbjct: 479 VRNAVDHGIESPEEREASGKVRSGKVILAAEQEGDHILLSISDDGKGMDPNVLRSIAVKR 538

Query: 420 GLATEAELENMTDQQIAQYIFRAGLSTAEKVTAVSGRGVGMDVVKTNIEKIGGTVELKTW 479
           G+  +   + ++D +    IF  G ST  +++ VSGRGVGMDVVKT I ++ G++ + + 
Sbjct: 539 GVMDKDAADRLSDTECYNLIFAPGFSTKTEISDVSGRGVGMDVVKTKISQLNGSINIYST 598

Query: 480 PGKGSRFVIKIPLTLAIVSALIVEASGERFAIPQISVLELVRVTANSETTIEQINTAPVL 539
            G+GS+ VIK+PLTLAI+  L+V    + FA P ++V E+  +   S T +  ++   V+
Sbjct: 599 KGQGSKIVIKVPLTLAIMPTLMVMLGNQAFAFPLVNVNEIFHLDL-SRTNV--VDGQEVV 655

Query: 540 RLRDRLMPLVSLSALLRLDDGDDEELGKTADATAGRRDETFIVVSQVGTYTFGIIVDRVF 599
            +RD+ +PL  L   L             + A    + E  +V+  VGT   G +VD++ 
Sbjct: 656 IVRDKALPLFYLKRWL------------VSSAAHVEQGEGHVVILSVGTQRIGFVVDQLV 703

Query: 600 DTEEIVVKPVAPILRHVSMFSGNTILGDGSVIMILD 635
             EE+V+KP+  +L+     SG TI GDG + +ILD
Sbjct: 704 GQEEVVIKPLGKMLQGTPGMSGATITGDGRIALILD 739



 Score = 80.9 bits (198), Expect = 3e-19
 Identities = 66/230 (28%), Positives = 102/230 (44%), Gaps = 4/230 (1%)

Query: 2   DDLLSEFLTETSESIATLDVELVNLERNPNDKGILSNIFRLVHTIKGTCGFLGLPRLESL 61
           +++L +FL E  E +  L  +LV LE  P+D  +L+ IFR  HT+KG  GFL L  L   
Sbjct: 7   EEILQDFLVEAGEILEQLSEQLVELESRPDDADLLNAIFRGFHTVKGGAGFLQLNELVEC 66

Query: 62  AHAGENVLGKFRDGDLEVTPAAVTVILHTIDRIKEILGHLEANEVEP-EGDDKDLKAHLN 120
            H  ENV    R G+  V    + V+L  +D +  +    E  E  P      +L A L 
Sbjct: 67  CHIAENVFDILRKGERRVDSELMDVVLEALDAVNSMFS--EVRERSPITAATPELLAALA 124

Query: 121 AFAEGKQPSVAAMAPAPARAAGSGPAISEGGYPVAAELLAEVSEAVAKGKRAATEAELAA 180
             AE +    AA    PA       A  +       +LL  ++   A+ +     A  AA
Sbjct: 125 RLAEPQSADEAAPVAEPAVEEPVAEASGDITDNEFEQLLDSLNTVKAQAEAPVAPAAPAA 184

Query: 181 ELAAELAAAEKAEQAVAAPVPEVIPEVK-AATPVVQPAKPPAVTAAHDTN 229
            +A  +A+ E  +    + + ++  + + A   VV P  P A  AA D++
Sbjct: 185 PVADGVASDEITDAEFESLLDQLHGKGQFAPDAVVPPTAPAAPKAAGDSS 234