Pairwise Alignments

Query, 942 a.a., CheA Signal Transduction Histidine Kinases (STHK) (NCBI) from Rhodospirillum rubrum S1H

Subject, 761 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

 Score =  256 bits (655), Expect = 3e-72
 Identities = 142/429 (33%), Positives = 246/429 (57%), Gaps = 32/429 (7%)

Query: 215 QPAKPPAVTAAHDTNGPNGGGGGEQKEGSVASQSIRVNVELLENLMTLVSELVLTRNQLL 274
           +PA+P A+T     +          K      ++++V+ E ++ LM LV EL++ +N + 
Sbjct: 348 EPAQPSAITVNEQLD----------KVKKKQIKTLKVDQEKVDLLMDLVGELIVAKNSMQ 397

Query: 275 QMVRGSDDSEFVAPLQR--------LSHITTDLQEGVMKTRMQPIGNAWAKLPRIVRDLS 326
            +   +++   V  L +        +S +  DLQ  VM+ RM P+   + + PR++RD+S
Sbjct: 398 YLAYRAENEFGVRKLAQDIKAEQSVISRLAEDLQSVVMQVRMVPLATVFQRYPRLIRDIS 457

Query: 327 IEMHKKIDLQMYGADTELDRQVLEMIKDPLTHMVRNSGDHGLEFPDERAAAGKPETGVIK 386
            ++ K++DL + G DTE D+ ++E + +PL H++RN+ DHG+E PD R   GK  TG I 
Sbjct: 458 RKLGKQVDLIIEGEDTEADKSIVEDLSEPLVHLIRNALDHGIESPDIRREQGKNPTGKIT 517

Query: 387 LNAYHEGGHIIIEISDDGRGLNLERIRAKALSNGLATEAELENMTDQQIAQYIFRAGLST 446
           L+A+     +II++SDDG+G+++ER++ KAL  GL   ++LE M+ Q+I   IF  G ST
Sbjct: 518 LSAFTLDDSVIIKMSDDGKGVDVERVKTKALERGLVEASKLERMSQQEIIHLIFEPGFST 577

Query: 447 AEKVTAVSGRGVGMDVVKTNIEKIGGTVELKTWPGKGSRFVIKIPLTLAIVSALIVEASG 506
            E+V+ +SGRGVGMD V+T IE+ GGT+ L + PGKGS   + +PL++ I   ++ E   
Sbjct: 578 VEQVSDLSGRGVGMDAVRTAIERNGGTLTLSSEPGKGSEITMILPLSMTISRVMMFELEQ 637

Query: 507 ERFAIPQISVLELVRVTANSETTIEQINTAPVLRLRDRLMPLVSLSALLRLDDGDDEELG 566
           + FAIP  SV++ ++++ + +  I ++       LR   +P++ L     ++        
Sbjct: 638 QSFAIPIESVIQTLKISRHKD--IRRVKNLDTFILRGETVPILYLKRAFEMNSAQIYP-- 693

Query: 567 KTADATAGRRDETFIVVSQVGTYTFGIIVDRVFDTEEIVVKPVAPILRHVSMFSGNTILG 626
                     D   I+V +VG    G+ VDR+ + +++++KP+   L   S++ G  I+G
Sbjct: 694 ----------DIQPILVVRVGDDVLGLAVDRLQEGQDVIIKPLEGALATFSIYRGAAIMG 743

Query: 627 DGSVIMILD 635
           DG V+++LD
Sbjct: 744 DGRVLLVLD 752



 Score = 61.6 bits (148), Expect = 2e-13
 Identities = 43/146 (29%), Positives = 73/146 (50%), Gaps = 10/146 (6%)

Query: 1   MDDLLSEFLTETSESIATLDVELVNLERNPNDKGILSNIFRLVHTIKGTCGFL-GLPRLE 59
           M+ ++  F+ E+ + I +    L+ LE NP+DK I++ +FR +HT+KG  G L  +    
Sbjct: 1   MNPIMQNFIIESRDLIESAARGLLALEANPDDKAIINELFREIHTVKGASGILDNIAPFT 60

Query: 60  SLAHAGENVLGKFRDGDLEVTPAAVTVILHTIDR----IKEILGHLEANEVEPEGDDKDL 115
            LAH  E+++ K RDG + +    + ++L   D+    I+E+  H E +  E     K +
Sbjct: 61  QLAHRMEDLMQKVRDGHVALNGTMLDLMLGCCDQFLLWIEELEQHQELS-AEAVSISKQM 119

Query: 116 KAHLNAFAEGKQPSVAAMAPAPARAA 141
            A L    +    +     P PA AA
Sbjct: 120 IAQLAPLTQ----AAPTHTPTPAVAA 141