Pairwise Alignments

Query, 942 a.a., CheA Signal Transduction Histidine Kinases (STHK) (NCBI) from Rhodospirillum rubrum S1H

Subject, 708 a.a., Sensor histidine kinase from Sinorhizobium meliloti 1021

 Score =  203 bits (517), Expect = 3e-56
 Identities = 171/649 (26%), Positives = 288/649 (44%), Gaps = 92/649 (14%)

Query: 4   LLSEFLTETSESIATLDVELVNLERNPN---DKGILSNIFRLVHTIKGTCGFLGLPRLES 60
           LL+ F  E  E  + ++  ++ +E + +    + +   + R  H++KG  G L +  +E+
Sbjct: 11  LLTMFTQEVRERASEMENAVLAIEASGDADRKRHLQEQLLRGAHSLKGAAGLLQVRGVET 70

Query: 61  LAHAGENVLGKFRDGDLEVTPAAVTVILHTIDRIKEILGHLEANEVEPEGDDKDLKAHLN 120
           + H  E +L    +  L +  + + ++L   D I++    LE+ E+      +D+   L 
Sbjct: 71  ICHWMEEILSMAANVGLVLERSRLDLLLSAADAIRDAANLLESGEIPSPAHGQDVVEKLK 130

Query: 121 AFAEGKQPSVAAMAPAPARAAGSGPAISEG-GYPVAAELLAEVSEAVAKGKRAATEAELA 179
           A A                 AGS   + E   +P  AE    +      G    + A L 
Sbjct: 131 AVA----------------TAGSDDGLKEAHHHPPMAEPEIAIRATDTDGSMRVSAARLD 174

Query: 180 AEL--AAELAAAEKAEQAVAAPVPEVIPEVKAATPVVQPAKPPAVTAAHDTNGPNGGGGG 237
           A L  + E+       +  A     +  E   A  +  P   P    A      +  GG 
Sbjct: 175 ALLYRSGEMLTFNAVMRRHAEQASSLREE---ARKMRAPGSDPTGQVA------SVEGGL 225

Query: 238 EQKEGSVASQSIRVNVELLENLMTLVSELVLTRNQLLQMVRGSDDSEFVAPLQRLSHITT 297
            Q      +  +R +V L+++ +T + E +                       RL+    
Sbjct: 226 RQ-----LAAFLRQDVRLMQSAVTALDEEI-----------------------RLA---- 253

Query: 298 DLQEGVMKTRMQPIGNAWAKLPRIVRDLSIEMHKKIDLQMYGADTELDRQVLEMIKDPLT 357
                    R QP   A   L RIVRD++    K+ +L++ G + E+DR ++  ++D L 
Sbjct: 254 ---------RTQPFAEACKGLGRIVRDVAAASGKRAELEISGGELEVDRSIVSALQDSLR 304

Query: 358 HMVRNSGDHGLEFPDERAAAGKPETGVIKLNAYHEGGHIIIEISDDGRGLNLERIRAKAL 417
           H+VRN+  HG++ P+ER  AG+PE G I ++A   G  + + + DDGRGLNL      AL
Sbjct: 305 HLVRNAVAHGIQTPEERRTAGRPEKGRILVSAAMRGNRMEVRVEDDGRGLNL------AL 358

Query: 418 SNGLATEAELENMTDQQIAQYIFRAGLSTAEKVTAVSGRGVGMDVVKTNIEKIGGTVELK 477
            +    E+      +  I + +F  G+ST+  VT++SGRG+G+D+VK N+EK+ G V++ 
Sbjct: 359 LSAATGESTHGKQAEADILRRVFEPGVSTSATVTSLSGRGIGLDIVKRNVEKLRGAVDVS 418

Query: 478 TWPGKGSRFVIKIPLTLAIVSALIVEASGERFAIPQISVLELVRVTANSETTIEQINTAP 537
             P  G+ F + +PLTLA V  L V A G  F I   SV  ++R+     T IE  N   
Sbjct: 419 QVPTGGAAFTLTLPLTLATVRVLEVLAGGHVFTIDTTSVQRVIRIDRGDFTLIEGRN--- 475

Query: 538 VLRLRDRLMPLVSLSALLRLDDGDDEELGKTADATAGRRDETFIVVSQVGTYTFGIIVDR 597
            +R     MP V +S  LRL             + A       +V S  G  +  ++VD 
Sbjct: 476 FVRTPAGPMPFVDVSLWLRLQPN---------RSPASETTPAVVVDSPSG--STAVLVDE 524

Query: 598 VFDTEEIVVKPVAPILRHVSMFSGNTILGDGSVIMILDPNGIASATGEV 646
           +   +E++ + + P L +V  +S   +L DG + ++L+   +A A  EV
Sbjct: 525 ITGEQELLARSLGPRLANVRRYSRGMVLPDGRIALLLNVAALAEAAAEV 573



 Score = 70.1 bits (170), Expect = 5e-16
 Identities = 40/120 (33%), Positives = 67/120 (55%), Gaps = 5/120 (4%)

Query: 815 RVLLVDDSPFFRNLLTPLLSVSGYAVT-AVESAEKALELREKGHSFEAIISDIEMAGMDG 873
           +VL+VDDS + R L+  +L  +GY VT A +  E   +LR+  H  + +++D++M  M+G
Sbjct: 591 KVLVVDDSKYVRTLVKLILEGAGYDVTMATDGTEALKQLRD--HGADVVVADVDMPSMNG 648

Query: 874 FSFAAAIRADGRWGNLPLIALSSHATERDLQRGREAGFDDYVAK--FDRDSLLEVLGQLV 931
           F    AIR   R+   P++ ++   +  D  +G  AG + Y+ K  FD    LE + Q+V
Sbjct: 649 FELTRAIRQSDRFTGTPVVLVTGRESLEDKVKGLRAGANAYLRKDQFDAHDFLETMRQVV 708