Pairwise Alignments

Query, 939 a.a., Alpha amylase, catalytic region (NCBI) from Rhodospirillum rubrum S1H

Subject, 928 a.a., maltooligosyl trehalose synthase from Pseudomonas fluorescens FW300-N2E3

 Score =  599 bits (1544), Expect = e-175
 Identities = 362/900 (40%), Positives = 480/900 (53%), Gaps = 29/900 (3%)

Query: 10  ATYRLQFHAGFTFTDAAAQVGYLRDLGVSHLYASPILKARPGSTHGYDIIDHGALNPELG 69
           AT R+QFH GFT  DA   V Y   LG+SHLYASP+L AR GS HGYD++D   +NPELG
Sbjct: 11  ATLRVQFHHGFTLDDAVPLVPYFCGLGISHLYASPLLSARAGSMHGYDVVDPSRVNPELG 70

Query: 70  GERGFAQLSEALAGAGLGLIIDIVPNHMGIGAADNGWWLDVLEWGRGGRYAGYFDIDWFP 129
           GE    +L  AL    +GLI+DIV NHM +G ADN WWLD+LEWGR   Y  +FDI W  
Sbjct: 71  GEAALRRLVSALRAQDMGLILDIVSNHMAVGGADNPWWLDLLEWGRLSPYGEFFDIQWHS 130

Query: 130 ATPGLREKVVLPVLGDLYGRVLDAGDLVARFDDADGSFSIWYHEHRFPVCPATYATILDL 189
             P L  +++LP LG  YG  L  G L   FD   GSF + +HEH FP+CP  YA +L  
Sbjct: 131 PDPLLEGQLLLPFLGSDYGSALQDGTLTLHFDPGRGSFHVEHHEHHFPICPTDYAELLK- 189

Query: 190 CLKEVALPEAAALMTEARRLRGTPRSDIRRKAQRTRGETFKRSLREAAATPALAAALASV 249
                  P+ +  +  A +L+            ++   +  R L++A  T A   A+   
Sbjct: 190 -------PDDSLDVERALQLK-VLADQFTTLHYQSDAHSLARPLQQALITLASDPAILRC 241

Query: 250 T--TLFGPAATDGKGLTRLHALLENQHYRPSFWRIAGHEINYRRFFQINDLAGLRVEEKE 307
               L    +   +G +RLH LLE Q YR + WR A  +IN+RRFF IN+LAGLRVE   
Sbjct: 242 IEHNLSRHDSRQPEGFSRLHELLERQSYRLASWRTAADDINWRRFFDINELAGLRVERPA 301

Query: 308 VFDASHALIGDLVGSGRVHGVRVDHIDGLLDPHQYLDRLQGLVAPFAETLGFRPGAFPVY 367
           VF+A+HA I +L+  G V G+R+DHIDGL DP  Y  +L+  V   +          P+Y
Sbjct: 302 VFEATHAKIFELIAEGLVDGLRIDHIDGLADPRGYCRKLRRRVNALSPL-----RHVPIY 356

Query: 368 VEKILEHGEALRRDWPTAGTTGYDALNEISTLFVAAPGLETLRALWRREVGDEAADPVRV 427
           +EKIL  GE LRRDW   GTTGY+ +N++S L     G + L  LW R     AA  +  
Sbjct: 357 IEKILGDGETLRRDWQVDGTTGYEFMNQLSLLQHDPQGEQVLGELWSRHTERPAAF-IEE 415

Query: 428 AVRAKRQVMDEELASELEVLTDQCTRLLKRDPQTRDFSRAGINRALREIVAQFPVYRSYI 487
           A  A++Q+++  LA + E +     ++ + D  +RD +   I RAL+E++  FPVYR+YI
Sbjct: 416 AQLARQQILNGSLAGDFESVAQALLQVARDDLMSRDLTLGAIRRALQELIVHFPVYRTYI 475

Query: 488 GPKGATPEDRAVIATAIRRARRARAVSHGALYDVLDEVLTGQ-WGKGVGGRPRVAVLHLA 546
           GP G + +D+     A+  AR+    +   + D L   L GQ W +   GR R  + H  
Sbjct: 476 GPCGRSAQDQVFFQHAMNGARQTLGEADWPVLDYLALWLGGQPWRERPVGRQRKILKHAC 535

Query: 547 RKVQQYTGPVMAKGMEDTTFYRVMPLVSLNEVGGGPGLTPLDGAAFHQGMAERQRFLPRA 606
            + QQ T P  AK +EDT  YR   L+S N+VG          A FH   + R    P  
Sbjct: 536 VRFQQLTSPTAAKAVEDTALYRSGVLLSRNDVGFNTERFSAPLADFHTACSRRLDEFPDT 595

Query: 607 LVATATHDTKRGEDVRARLHGLSECPERWAERLSAWREILAPLCQTVEGEVWPSPADQIL 666
           L+A+ATHD KRGED RARL  LSE    +AE +  WR   A L +       PSPAD++L
Sbjct: 596 LLASATHDHKRGEDSRARLALLSERSTWYAETVEGWRTQSAALRRDPS---MPSPADELL 652

Query: 667 FLQTLVGIWPAGLDA-TAPVPPTLLDRLRAYMRKAAREAKTHTSWTDPDEDYEAALEAYG 725
             QTL+  WP  L    A       +RL  + +KA REAK  +SW+ P+E YE A  A+ 
Sbjct: 653 LYQTLLASWPLELHCEDAQSMTAYTERLWQWQQKALREAKLQSSWSAPNEPYEQATRAFL 712

Query: 726 VGALTGEPAPKIRREVAELVTHLEGPGRTTALAQLTLRLTIPGVPDTYQGTELWDDSLVD 785
              L       +R  +A+    +   G    LAQ  LR+T+PGV D YQG E WD SLVD
Sbjct: 713 ERLLLSPEGLPLRSAIADAAQAIACGGALNGLAQTLLRMTVPGVADLYQGNEFWDFSLVD 772

Query: 786 PDNRRPVDFALRREKAADLAGVGGAAVEKLLADPAGAAKMLVLTRLLALRRRLPDLFLEG 845
           PDNRR VDF++R++             + L     G  K  ++   LALR R P LF  G
Sbjct: 773 PDNRRAVDFSVRQQALHTPVDTR----QLLHTWRDGRIKQALIAHTLALRARYPQLFQRG 828

Query: 846 GYEPLTVTGKAAGHVVAFLRRHGEATLLVAVPRLTMTLSGEGAS---VAKAWGDTTLVLP 902
            Y+ L V G  AG V+AF R       +V VP    +L    A+    A  WGDT + LP
Sbjct: 829 RYQALQVVGSQAGRVLAFARELDGQRAIVLVPVRVASLLESSATPQVPALLWGDTRVKLP 888