Pairwise Alignments

Query, 939 a.a., Alpha amylase, catalytic region (NCBI) from Rhodospirillum rubrum S1H

Subject, 914 a.a., alpha-amylase from Azospirillum brasilense Sp245

 Score =  694 bits (1792), Expect = 0.0
 Identities = 419/948 (44%), Positives = 537/948 (56%), Gaps = 55/948 (5%)

Query: 8   PTATYRLQFHAGFTFTDAAAQVGYLRDLGVSHLYASPILKARPGSTHGYDIIDHGALNPE 67
           P ATYR+Q  A F F   A    Y+  LGVSHLYASP +KARPGSTHGYDI+DH ALNPE
Sbjct: 2   PLATYRVQLRAEFGFDRTAGIADYMARLGVSHLYASPYMKARPGSTHGYDIVDHNALNPE 61

Query: 68  LGGERGFAQLSEALAGAGLGLIIDIVPNHMGIGAADNGWWLDVLEWGRGGRYAGYFDIDW 127
           LG E  F  + EAL   GLG I+D VPNHMG+G +DNGWWLDVLEWG    YAGYFDI+W
Sbjct: 62  LGSEESFHAMVEALKRNGLGQILDFVPNHMGVGGSDNGWWLDVLEWGPDSPYAGYFDIEW 121

Query: 128 FPATPGLREKVVLPVLGDLYGRVLDAGDLVARFDDADGSFSIW-YHEHRFPVCPATYATI 186
            P    L  KV++P+LGD +G VL++G L  RFD   G F++W Y  H+ P+ PA Y TI
Sbjct: 122 EPDRRYLHGKVLVPLLGDQFGAVLESGGLELRFDREAGGFAVWAYDTHKLPIRPADYGTI 181

Query: 187 LDLCLKEVALPEAAALMTEARRLRGTPRSDIRRKAQRTRGETFKRSLRE-AAATPALAAA 245
           L         P+   +    R L      D  R  Q  R    K  L    +  P +A A
Sbjct: 182 LG-----DDQPDLERIGDAFRHL------DQVRPHQIRRANALKAELAALVSEKPDVAEA 230

Query: 246 LASVTTLFGPAATDGKGLTRLHALLENQHYRPSFWRIAGHEINYRRFFQINDLAGLRVEE 305
           +      F  A  + +   RL  L+  Q++R +++++A  +INYRRFF IN+LAGLR+EE
Sbjct: 231 VERRLKRFRGAEGEPESWRRLTDLIAAQNWRAAYFKVAADDINYRRFFNINELAGLRMEE 290

Query: 306 KEVFDASHALIGDLVGSGRVHGVRVDHIDGLLDPHQYLDRLQGLVAPFAETLGFRPGAFP 365
           +E+FD +H L   LV  G + G+R+DHIDGL DP  Y +RL             RP  F 
Sbjct: 291 RELFDVAHRLAFKLVDDGTLDGLRIDHIDGLYDPKGYCERLAQATE--------RP--FY 340

Query: 366 VYVEKILEHGEALRRDWPTAGTTGYDALNEISTLFVAAPGLETLRALW-----RREVGDE 420
           + VEKIL   E LR DWP  GTTGY+  N +  LFV   G E    L+     RRE  DE
Sbjct: 341 LVVEKILARHERLREDWPIDGTTGYEFANLMGGLFVDPRGEEAFTKLYADFTGRRESFDE 400

Query: 421 AADPVRVAVRAKRQVMDEELASELEVLTDQCTRLLKRDPQTRDFSRAGINRALREIVAQF 480
                 V   +K ++M+ E+ASEL VL  Q +R+ + +P+T DF+   +++AL+E +A+F
Sbjct: 401 ------VVRTSKIRIMESEMASELHVLARQASRIARANPRTADFTANILHQALKETIARF 454

Query: 481 PVYRSYIGPKGATPEDRAVIATAIRRARRARAVSHGALYDVLDEVLTGQW-GKGVGGRPR 539
           PVYR+Y+  +G +  DR  I  AI +AR+A   +  + YD L  +LT     +   G  R
Sbjct: 455 PVYRTYVDWRGVSELDRRSIDWAITQARKADPNTDASAYDFLHRLLTTDLVAQPRSGYSR 514

Query: 540 VAVLHLARKVQQYTGPVMAKGMEDTTFYRVMPLVSLNEVGGGPGLTPLDGAAFHQGMAER 599
             VL  A + QQY+GPVMAKG+EDT FYR   L +LNEVGG P    +  A FH   AER
Sbjct: 515 QQVLRFAMRFQQYSGPVMAKGLEDTAFYRYNRLAALNEVGGHPEHFGVGSANFHNANAER 574

Query: 600 QRFLPRALVATATHDTKRGEDVRARLHGLSECPERWAERLSAWREILAPLCQTVEGEVWP 659
               P A++ + THDTKRGED RARL+ LSE PE W  ++  W  +L      VEG   P
Sbjct: 575 AARWPHAMLGSTTHDTKRGEDTRARLYALSEMPEEWERQIQTWSRLLRARRGDVEGTAPP 634

Query: 660 SPADQILFLQTLVGIWPAGLDATAPVP------PTLLDRLRAYMRKAAREAKTHTSWTDP 713
              D+ LF Q LVG WPA L    P            +RL   M K+ REAK H++W  P
Sbjct: 635 DRNDEYLFYQLLVGAWPAELTGADPASLDPQAMTEFAERLAGAMTKSMREAKVHSTWAAP 694

Query: 714 DEDYEAALEAYGVGALTGEPAPKIRREVAELVTHLEGPGRTTALAQLTLRLTIPGVPDTY 773
           DE YE+A+ ++   AL    +             L   G    L Q  L+LT PGVPD Y
Sbjct: 695 DEAYESAMTSFVHDALDVSRSTAFFDAFLPFQERLARIGMVNGLTQTLLKLTSPGVPDIY 754

Query: 774 QGTELWDDSLVDPDNRRPVDFALRREKAADLAGVGGAAVEKLLAD-PAGAAKMLVLTRLL 832
           QG ELW+ SLVDPDNRRPVD+  RR     L  V GA +  LL+    GA K+ +  R L
Sbjct: 755 QGCELWNFSLVDPDNRRPVDYDARRRL---LDEVEGAEIGSLLSRWQDGAVKLSLTRRAL 811

Query: 833 ALRRRLPDLFLEGGYEPLTVTGKAAGHVVAFLRRHGEATLLVAVPRLTMTLSGEGASVAK 892
           ALR  +PDLF +G Y PL  TG+ A HVVAF RR G+ T++VA PRL   L GE      
Sbjct: 812 ALRTAMPDLFAKGEYLPLEATGERAEHVVAFARRLGDETVVVAAPRLVGAL-GE----TP 866

Query: 893 AWGDTTLVLPDRLPLEGWTDCLSGDRL--ADLPSCATLFARLPVAVLL 938
            WGDT++ LP     + W + L+   L  AD  + A LF   PVA+L+
Sbjct: 867 EWGDTSVPLPRG---QRWRNALTDGTLEAADAVTAADLFRDFPVALLV 911