Pairwise Alignments

Query, 939 a.a., Alpha amylase, catalytic region (NCBI) from Rhodospirillum rubrum S1H

Subject, 928 a.a., malto-oligosyltrehalose synthase from Rhodopseudomonas palustris CGA009

 Score =  637 bits (1642), Expect = 0.0
 Identities = 394/950 (41%), Positives = 508/950 (53%), Gaps = 62/950 (6%)

Query: 8   PTATYRLQFHAGFTFTDAAAQVGYLRDLGVSHLYASPILKARPGSTHGYDIIDHGALNPE 67
           PTATYRLQ  A F F  A A V YL+ LG+SH+YASP +KAR GSTHGYDI+DH  LNPE
Sbjct: 6   PTATYRLQLTADFGFDAATAIVPYLKRLGISHVYASPFMKARKGSTHGYDIVDHTQLNPE 65

Query: 68  LGGERGFAQLSEALAGAGLGLIIDIVPNHMGIGAADNGWWLDVLEWGRGGRYAGYFDIDW 127
           LGGE GFA+LS AL    +GLI+D VPNH+G+  ADN WWLDVLEWG    +A  FDIDW
Sbjct: 66  LGGEEGFARLSAALKQHDIGLILDFVPNHVGVHYADNPWWLDVLEWGPASPHAASFDIDW 125

Query: 128 FPATPGLREKVVLPVLGDLYGRVLDAGDLVARFDDADGSFSIWYHEHRFPVCPATYATIL 187
                  R  V+LP++G  YG+ L+AG +  R+D ADGSFS WY EHR P+ P  Y+ IL
Sbjct: 126 EMLPFRARGGVLLPIIGSSYGKTLEAGVIELRYDAADGSFSAWYFEHRLPIAPQRYSEIL 185

Query: 188 DLCLKEVALPEA---AALMTEARRLRGTPRSDIRRKAQRTRGETFKRSLREAAATPALAA 244
              ++E     +    A++  A R  G           R     FK +L+   A P  A 
Sbjct: 186 RTIVREAGAENSDAGRAILDLAARYTGLGH------PSRKEAPEFKAALQ---AIPGAAE 236

Query: 245 ALASVTTLFGPAATDGKGLTRLHALLENQHYRPSFWRIAGHEINYRRFFQINDLAGLRVE 304
            +      +         +  LH LLE QHY+   W++A  EINYRRFF +N LAGLRVE
Sbjct: 237 VITRGLDAYRAGEGRATQIQALHNLLERQHYKLGHWQLASSEINYRRFFDVNTLAGLRVE 296

Query: 305 EKEVFDASHALIGDLVGSGRVHGVRVDHIDGLLDPHQYLDRLQGLVAPFAETLGFRPGAF 364
           +   F+A H+ +  L+  G++ G+R+DHIDGL DP QY  RL+ L            GA 
Sbjct: 297 DAGTFEAIHSRVKKLLSDGQLQGLRLDHIDGLRDPAQYFQRLRRLARDAQSA-----GAP 351

Query: 365 PVY--VEKILEHGEALRRDWPTAGTTGYDALNEISTLFVAAPGLETLRALWRREVG-DEA 421
           P+Y  +EKIL  GEAL R     GTTGY+ LN I+ + +   GL+ L   WR+      A
Sbjct: 352 PLYTVIEKILGEGEALHRFAGVHGTTGYEWLNVITRVLLDGRGLKPLDETWRQASNLSPA 411

Query: 422 ADPVRVAVRAKRQVMDEELASELEVLTDQCTRLLKRDPQTRDFSRAGINRALREIVAQFP 481
            DPV  A  AKR+V++  L SE  VLT    R+      TRDFS   + +     V  FP
Sbjct: 412 FDPVLKA--AKRRVLETLLLSEFTVLTRLLARIASGHYSTRDFSADNLRQVFELYVLHFP 469

Query: 482 VYRSYIGPKGATPEDRAVIATAIRRARRARAVSHGALYDVLDEVLTGQW---GKGVGGRP 538
           VYR+Y+     T  DR +I   I +AR     +   +++ L +VLT      G+ +  +P
Sbjct: 470 VYRTYLTGNSPTQLDRKLIEDTIAKARADWFGADDGIFEFLKDVLTMDLVKPGRALHSKP 529

Query: 539 RVAVLHLARKVQQYTGPVMAKGMEDTTFYRVMPLVSLNEVGGGPGLTPLDGAAFHQGMAE 598
           RV     A KVQQ+TGP MAK +EDT FYR   L++LNEVGG P    +  AAFH+ M  
Sbjct: 530 RVR--RFALKVQQFTGPTMAKSLEDTAFYRYHRLLALNEVGGDPAAPEMPIAAFHEAMQS 587

Query: 599 RQRFLPRALVATATHDTKRGEDVRARLHGLSECPERWAERLSAWREILAPLCQTVEGEV- 657
           R +  P  + AT THD KRGED RARL  L+E P  WA  +  W+ + AP    V+G++ 
Sbjct: 588 RAKDWPHGMTATMTHDAKRGEDARARLLSLAEIPGEWASAVGKWKLLNAPHL-VVDGDMR 646

Query: 658 WPSPADQILFLQTLVGIWPAGLDATAPVPPTLLDRLRAYMRKAAREAKTHTSWTDPDEDY 717
            PSPA + +  Q L+G WP   D      P   DR + +  KAARE K  T+W +P+  Y
Sbjct: 647 APSPAFEYMLYQALIGAWPLSPD------PDFTDRFQGFALKAAREGKQETNWLNPNLAY 700

Query: 718 EAALEAYGVGALTGEPAPKIRREVAELVTHLEGPGRTTALAQLTLRLTIPGVPDTYQGTE 777
           E  +  +    L  + +      V  L   L   G    L+QLTL+ T+PGVPD YQGTE
Sbjct: 701 EEGVRLFIDRLLDPKLSGPFLESVDSLHRRLSLLGALNGLSQLTLKATMPGVPDFYQGTE 760

Query: 778 LWDDSLVDPDNRRPVDFALRREKAADLAGVGGAAVEKLLADP----------AGAAKMLV 827
            WD SLVDPDNRRPVDF  R            AA+E L   P           G  K+  
Sbjct: 761 FWDFSLVDPDNRRPVDFDAR-----------AAALESLDDKPDWATLTANWSDGRVKLAW 809

Query: 828 LTRLLALRRRLPDLFLEGGYEPLTVTGKAAGHVVAFLRRHGEATLLVAVPRLTMTLSGEG 887
              LL LRR    LF +G Y PL V G    H+VAF R  G   ++V V +    LS EG
Sbjct: 810 THHLLKLRRDQAALFSDGDYRPLAVKGAHRDHIVAFARTRGSEAMIVVVAKGLAALSDEG 869

Query: 888 ASVAKAWGDTTLVLPDRLPLEGW-TDCLSGDRLADLPSCATLFARLPVAV 936
               + W  T       +  +G+  +   G+  +       LF  LPVAV
Sbjct: 870 ----RQW-PTGDAFDGAIETKGYAVEIGDGETTSGELQLRDLFRHLPVAV 914