Pairwise Alignments

Query, 290 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

Subject, 288 a.a., ABC spermidine/putrescine transporter, inner membrane subunit from Pseudomonas fluorescens FW300-N2E2

 Score = 64.3 bits (155), Expect = 3e-15
 Identities = 68/296 (22%), Positives = 130/296 (43%), Gaps = 15/296 (5%)

Query: 1   MSDPATKARQGLRFLGVVPFFAYAALFLLAPTAFL--VIGAFQNQEGGFTLDNLFNLANP 58
           M  P   +  G  +L + P   +  + + A    L   +G    +  GF+L +   L  P
Sbjct: 1   MRPPRGISPTGRAWLFLSPSMLFLGVLIAASLLVLRMSVGTKGAEWSGFSLASYEQLLEP 60

Query: 59  TIVAAYWISIKVSAASAIGGAVIGLLIAQAAVNGGLPGWIRPTLFTFSGVASNFAGIPL- 117
             + +  ++++++  SA+   ++ + +A        P  +   +F  + +      + L 
Sbjct: 61  YYLKSLLLTLRLALISAVIAVLLAIPVAYTMSRLASP--LLRRVFLAAVLLPLLVNLLLQ 118

Query: 118 AFAFLATLGRTGLVTALLKSWFGVNLYASGFNLL-GFWGLTLTYLYFQIPLMVLIISPAL 176
           ++ +L  LG  G++   L    G+ L      LL    G+ +  +    PL VL I+ A+
Sbjct: 119 SYGWLVILGPAGMLNQAL---MGLGLIKRPIMLLYNQNGVLMGLVQTAFPLAVLPIASAM 175

Query: 177 EGLRREWREAAATLGAGDIEYWRRIALPILWPSVLGATLLLFANAFGAIATAYALTGSSL 236
            G+ R + EAAATLGA   + +R++ LP+  P ++    L+FA    +      L G  +
Sbjct: 176 RGVARSYEEAAATLGASRFQVFRQVVLPMSLPGIITGATLVFAYNASSFVVPLLLGGRRV 235

Query: 237 NIVTILLYAQIRGDVLHDKNLGYALALGMIFI--TGLSNVLYIWLRGRGERWLRRS 290
            ++ ++++ QI   +    N   A A G++ I  T +   L  +  GR  R L  S
Sbjct: 236 PMLAVMVHDQIAPLM----NWPAASAAGVVLIVTTLMIMTLSEYFTGRRRRMLEAS 287