Pairwise Alignments

Query, 366 a.a., ABC transporter component (NCBI) from Rhodospirillum rubrum S1H

Subject, 329 a.a., spermidine/putrescine ABC transporter ATP-binding protein from Pseudomonas fluorescens FW300-N2C3

 Score =  276 bits (705), Expect = 7e-79
 Identities = 153/350 (43%), Positives = 214/350 (61%), Gaps = 21/350 (6%)

Query: 14  MAYLDLKDLHKAFGAARVVSDFTLAVERGEFVSFLGPSGCGKTTVLRMIGGFETPSSGRI 73
           M+Y+ ++ L K++    V SD    + +GEFV+ LGPSGCGK+T+LR I G     +G+I
Sbjct: 1   MSYVSVQHLQKSYAGTPVFSDINCEIAKGEFVTLLGPSGCGKSTLLRCIAGLTAVDAGQI 60

Query: 74  LIDGQDVTALTPARRKVGMVFQAYALFPNLTVAENVAFGLKVAREPASQTARRVDEMLEL 133
           ++DGQD+  L+P +R +GMVFQ+YALFPN+TV +NVAFGL++ +  AS + +RV E+L L
Sbjct: 61  ILDGQDIVPLSPQKRGIGMVFQSYALFPNMTVEQNVAFGLRMQKVDASDSRQRVLEILRL 120

Query: 134 IKLPQLKDRYPYQLSGGQQQRVALARALAVRPKILLLDEPLSALDAKIRVSLREEIRAVQ 193
           ++L     RYP+QLSGGQ QRVALAR+L  RP++LLLDEPLSALDA+IR  LRE+IR +Q
Sbjct: 121 VELHDFAARYPHQLSGGQCQRVALARSLVTRPRLLLLDEPLSALDARIRKHLREQIRQIQ 180

Query: 194 RELGITTVFVTHDQEEALSMSDRVVVMHNGRADQVGAPFEIYNAPKTRFVASFVGTLNLL 253
           RELG+TT+FVTHDQEEAL+MSDR+ +M+ G+  Q G    +Y AP   F A F+G  NLL
Sbjct: 181 RELGLTTIFVTHDQEEALTMSDRIFLMNQGKIVQSGDAETLYTAPVDVFAAGFIGNYNLL 240

Query: 254 EGVALAPDRLTIEGQGITTTRGLAGAAVGATVSLALRPEAIGPLPTPERTNKLEATVVDV 313
           +           +       R + G        +A+RPEAI       R+ + +A +   
Sbjct: 241 DA----------DSASKLLQRPVNG-------RIAIRPEAI----ELSRSGQADALIRSH 279

Query: 314 GFQGALVRVKVAVGRQSLTYVTFNAPNSPPPERGTALTLWFGPDDVLVLA 363
              G ++R +V      L     N   +     G  L L   P  +  +A
Sbjct: 280 SLLGNVIRYRVEARGVELVVDVLNRSAADLHPDGARLALSIDPSALCEVA 329