Pairwise Alignments

Query, 340 a.a., OmpA family protein (NCBI) from Rhodospirillum rubrum S1H

Subject, 321 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

 Score = 80.9 bits (198), Expect = 4e-20
 Identities = 62/215 (28%), Positives = 94/215 (43%), Gaps = 25/215 (11%)

Query: 139 GAGFKAYDDDIAFAYQGIAGVGYNVDQNIGVTLDYRFLGTTGLDFKTSAGKADYDAYYNH 198
           G  +  Y     ++Y G AG+ +N + N+ + L+Y+ L     D   +  +         
Sbjct: 109 GGAYVDYGSKDDYSYLGAAGLEFNTNHNVTMRLEYQNLTDINNDIVRARAE--------- 159

Query: 199 TVLVGLRYSFSKPSAPPP--------PAPVQEVVQQSVVEVPESYLVFFDFDSTSITPEA 250
           T  +G+ Y F     P P        PAPV   V++  V V +++       ST  T  A
Sbjct: 160 TATLGIAYKFGGSEEPAPVVEQRPAEPAPVAAPVEK--VAVTKTFTFQHLDSSTFATASA 217

Query: 251 GGIINTAATNAKSTG------SSTIEVTGHADRSGGDAYNLALSKRRAEAVVGELERNGI 304
                T     K  G       + +EV GH D +G +AYN  LS+RRA+AV   LE  GI
Sbjct: 218 ELKPATVQKLDKIVGYLNQYPQAKVEVVGHTDSTGSEAYNQKLSERRAQAVAKALEAQGI 277

Query: 305 SRSQIAVYAKGEADPLVPTPDGVREPQNRRVVVVL 339
             S+I+    GE+ P+          +NRRV +V+
Sbjct: 278 DASRISAKGLGESSPIASNATAEGREKNRRVELVI 312