Pairwise Alignments

Query, 469 a.a., DNA repair protein RadA (NCBI) from Rhodospirillum rubrum S1H

Subject, 478 a.a., DNA repair protein RadA from Synechococcus elongatus PCC 7942

 Score =  380 bits (976), Expect = e-110
 Identities = 224/485 (46%), Positives = 295/485 (60%), Gaps = 32/485 (6%)

Query: 1   MAKNAPRFVCQACGAVYPRWMGRCEACGEWNSIAEEAPAE----ALPKGQTGGRGGQRLS 56
           MA++   +VCQ CG   PR++GRC AC  WNS+ EEA A     A+       +   RL+
Sbjct: 1   MARSRSEYVCQNCGHRAPRYVGRCPACESWNSLVEEAIAPTAKTAIATVLPSRQRRDRLA 60

Query: 57  FVSLEGVGAPP---------PRLLTGIPELDRVAGGGLVAGSALLIGGDPGIGKSTLLLQ 107
               + V A P          R+ +G  E DRV GGGLV GS +LIGGDPGIGKSTLLLQ
Sbjct: 61  EAPPQAVAAQPLSAIADVSQQRIASGSGEFDRVLGGGLVPGSLVLIGGDPGIGKSTLLLQ 120

Query: 108 AVAGLARGGARSVYISGEEAIDQVRLRALRLGLEKAPVD------LAAATSVRDIVATLD 161
               L++     +Y+  EE+  QV+LR  R+   ++P        L     +  IVA L+
Sbjct: 121 TATALSQQQP-ILYVCAEESGQQVKLRWQRIAAHRSPNQADQQFYLLPEIDLDAIVAELE 179

Query: 162 SGEPPDVVVIDSIQTMYLDTLDSAPGTVAQVRAGSHELIRLAKRRGFVLFLVGHVTKEGQ 221
           +  PP V +IDSIQ +Y   L SAPG+VAQVR  +  L+R+AK+    L +VGHVTK+G 
Sbjct: 180 TLRPP-VAIIDSIQALYSPALGSAPGSVAQVRECTAALMRVAKQLTITLLIVGHVTKDGA 238

Query: 222 MAGPRVMEHMVDAVIYFEGERGHPFRILRAVKNRFGATDEIGVFEMSDAGLSEVPNPSAL 281
           +AGP+V+EH+VD V+YFEG+R    R+LR+VKNRFGA+ E+G+FEM D GL EV NPSAL
Sbjct: 239 IAGPKVLEHLVDTVLYFEGDRFASHRLLRSVKNRFGASQELGIFEMVDRGLEEVGNPSAL 298

Query: 282 FLAERRGNVTGSCVFAGMEGTRPMLVEIQALVGPSAPGSARRAVVGWDGGRLAMVMAVLE 341
           FL  R    +G+      EGTRP+LVE+QALV PS+  S RRA  G +  RL  ++AVLE
Sbjct: 299 FLGSRDQATSGTATIVACEGTRPLLVELQALVSPSSYSSPRRAGTGIEYNRLLQILAVLE 358

Query: 342 TRCGLALGGNDVYLNVAGGLRIGEPAADLAVAAALVSSFSGVPVPPDMVVFGEIGLSGEI 401
            R GL L   D Y+  AGGL + EPAADL +A ALV+SF    + PD V+ GEIGL G++
Sbjct: 359 KRLGLPLSKFDAYVASAGGLNVAEPAADLGIAIALVASFRDRCLRPDTVLIGEIGLGGQV 418

Query: 402 RAVAHGDTRLKEAAKLGFDQALMPARPRDSGKRGGPGVKEGLRMREIGHLQDLVALL--- 458
           R V+  + RLKEAAKLGF +AL+P        +G    +  L +  +  L D + L    
Sbjct: 419 RPVSQVELRLKEAAKLGFQRALLP--------KGQERCESDLELVPVSRLVDAIGLALQE 470

Query: 459 APPEN 463
           APP +
Sbjct: 471 APPSS 475