Pairwise Alignments

Query, 469 a.a., DNA repair protein RadA (NCBI) from Rhodospirillum rubrum S1H

Subject, 454 a.a., DNA repair protein RadA from Phaeobacter inhibens DSM 17395

 Score =  506 bits (1304), Expect = e-148
 Identities = 272/461 (59%), Positives = 327/461 (70%), Gaps = 20/461 (4%)

Query: 1   MAKNAPRFVCQACGAVYPRWMGRCEACGEWNSIAEEAPAEALPKG-----QTGGRGGQRL 55
           MAK    + C ACGA + +W GRC+ CGEWNSI E+   + L KG       G R G+ +
Sbjct: 1   MAKTT--YSCSACGASFSKWSGRCDGCGEWNSITED---KGLSKGGPASKSLGMRRGKTI 55

Query: 56  SFVSLEGVGAPPPRLLTGIPELDRVAGGGLVAGSALLIGGDPGIGKSTLLLQAVAGLARG 115
               L    APPPR   G+ ELDRV GGGLV  SA+L+GGDPGIGKSTLLLQA A  A+ 
Sbjct: 56  PLSDLATEEAPPPRTCCGVGELDRVLGGGLVPASAILVGGDPGIGKSTLLLQAAAQFAQS 115

Query: 116 GARSVYISGEEAIDQVRLRALRLGLEKAPVDLAAATSVRDIVATLDSGEPPDVVVIDSIQ 175
           G +++Y+SGEEA  QVR+RA RLGL +APV LAA T++RDI+ TL++ E P + +IDSIQ
Sbjct: 116 GLKTIYVSGEEASAQVRMRAQRLGLAEAPVKLAAETNLRDILTTLEA-ERPQLAIIDSIQ 174

Query: 176 TMYLDTLDSAPGTVAQVRAGSHELIRLAKRRGFVLFLVGHVTKEGQMAGPRVMEHMVDAV 235
           TM+ D +DSAPG+V+QVRA +HEL   AK  G  + +VGHVTKEGQ+AGPRV+EHMVD V
Sbjct: 175 TMWADHVDSAPGSVSQVRAAAHELTTFAKTNGVSIIMVGHVTKEGQIAGPRVVEHMVDTV 234

Query: 236 IYFEGERGHPFRILRAVKNRFGATDEIGVFEMSDAGLSEVPNPSALFLAERRGNVTGSCV 295
           +YFEGERGH FRILRAVKNRFG  DEIGVFEM+  GLSEV NPSALFL+ER     GS V
Sbjct: 235 LYFEGERGHQFRILRAVKNRFGPADEIGVFEMTGGGLSEVRNPSALFLSERGTPSPGSVV 294

Query: 296 FAGMEGTRPMLVEIQALVGPSAPGSARRAVVGWDGGRLAMVMAVLETRCGLALGGNDVYL 355
           F+G+EGTRP+LVE+QALV PS     RRAVVGWD  RLAM++AVLE RCG+   G DVYL
Sbjct: 295 FSGIEGTRPVLVEMQALVAPSPHSQPRRAVVGWDSSRLAMILAVLEARCGIPFAGLDVYL 354

Query: 356 NVAGGLRIGEPAADLAVAAALVSSFSGVPVPPDMVVFGEIGLSGEIRAVAHGDTRLKEAA 415
           NVAGG++I EPAADLAVAAAL+S+     +P D VVFGEI LSG +R     + RLKEA 
Sbjct: 355 NVAGGMKISEPAADLAVAAALLSAREDTALPADTVVFGEISLSGALRPAPQTENRLKEAQ 414

Query: 416 KLGFDQALMPARPRDSGKRGGPGVK-EGLRMREIGHLQDLV 455
           KLGF  A+ P+        GG  V   GL +R+   L   V
Sbjct: 415 KLGFTAAIAPS--------GGKSVAVPGLAVRQASDLAGFV 447