Pairwise Alignments

Query, 469 a.a., DNA repair protein RadA (NCBI) from Rhodospirillum rubrum S1H

Subject, 458 a.a., DNA repair protein RadA from Marinobacter adhaerens HP15

 Score =  398 bits (1023), Expect = e-115
 Identities = 213/430 (49%), Positives = 283/430 (65%), Gaps = 7/430 (1%)

Query: 1   MAKNAPRFVCQACGAVYPRWMGRCEACGEWNSIAEEAPAEALPKGQTGGR----GGQRLS 56
           MAK    +VC  CGA Y +W G+C AC  WN+I+E     +  KG  GGR     G    
Sbjct: 1   MAKTRTAYVCTECGADYSKWQGQCTACQAWNTISEVRGVSSNSKGARGGRFEGFAGSLSE 60

Query: 57  FVSLEGVG-APPPRLLTGIPELDRVAGGGLVAGSALLIGGDPGIGKSTLLLQAVAGLARG 115
             SL+ V  A  PR+ +G+ E DRV GGGLV GSA+L+GG PG GKSTLLLQA+  LA  
Sbjct: 61  VQSLDDVSLAEQPRISSGMQEFDRVLGGGLVEGSAVLMGGHPGAGKSTLLLQAICHLA-A 119

Query: 116 GARSVYISGEEAIDQVRLRALRLGLEKAPVDLAAATSVRDIVATLDSGEPPDVVVIDSIQ 175
              ++Y++GEE++ QV +RA RLGL    + + + TSV  ++   ++ E P ++V+DSIQ
Sbjct: 120 SVPALYVTGEESLQQVAMRAKRLGLPTKDLKMLSETSVERVMQVAEA-EKPRILVVDSIQ 178

Query: 176 TMYLDTLDSAPGTVAQVRAGSHELIRLAKRRGFVLFLVGHVTKEGQMAGPRVMEHMVDAV 235
            M++  ++SAPG+V+QVR  +  L R AK+ G +LFLVGHVTK+G +AGP+V+EHM+D  
Sbjct: 179 VMHMADIESAPGSVSQVRESAAYLTRFAKQTGTILFLVGHVTKDGSLAGPKVLEHMIDCS 238

Query: 236 IYFEGERGHPFRILRAVKNRFGATDEIGVFEMSDAGLSEVPNPSALFLAERRGNVTGSCV 295
           I  EG     +R LR +KNRFGA +E+GVF M + GL EV NPSA+FL        GS V
Sbjct: 239 ILLEGSSDSRYRTLRGIKNRFGAVNELGVFAMLEQGLKEVKNPSAIFLNRGEDAAPGSVV 298

Query: 296 FAGMEGTRPMLVEIQALVGPSAPGSARRAVVGWDGGRLAMVMAVLETRCGLALGGNDVYL 355
               EGTRPMLVEIQALV  +  G  RR  VG D  RLAM++AVL    G+ +   DV++
Sbjct: 299 MVVWEGTRPMLVEIQALVDMAQGGYPRRVAVGLDQNRLAMLLAVLHRHGGMHVSDQDVFV 358

Query: 356 NVAGGLRIGEPAADLAVAAALVSSFSGVPVPPDMVVFGEIGLSGEIRAVAHGDTRLKEAA 415
           NV GG+++ E +ADLA+ AA+VSSF    +P D+V+FGE+GLSGEIR V  G  R+ EAA
Sbjct: 359 NVVGGVKVNETSADLALLAAIVSSFRDRALPQDLVIFGEVGLSGEIRPVPSGQERIYEAA 418

Query: 416 KLGFDQALMP 425
           K GF +AL+P
Sbjct: 419 KHGFTRALVP 428