Pairwise Alignments

Query, 469 a.a., DNA repair protein RadA (NCBI) from Rhodospirillum rubrum S1H

Subject, 456 a.a., DNA repair protein RadA (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  349 bits (896), Expect = e-100
 Identities = 191/434 (44%), Positives = 269/434 (61%), Gaps = 9/434 (2%)

Query: 1   MAKNAPRFVCQACGAVYPRWMGRCEACGEWNS-----IAEEAPAEALPKGQTGGRGGQRL 55
           MAK    +VC ACGA  P+W G+C  C  WN+     +A E  +    +G       + L
Sbjct: 1   MAKVRETYVCSACGANTPQWRGQCPTCKAWNTLDAVTVARETRSGVRRQGAPDSVRPRPL 60

Query: 56  SFVSLEGVGAPPPRLLTGIPELDRVAGGGLVAGSALLIGGDPGIGKSTLLLQAVAGLARG 115
             VS EG G+P     TG+  LDRV G GLV G+A+L GG+PGIGKSTLLLQ    +A  
Sbjct: 61  RDVSDEG-GSP---FGTGLEALDRVLGSGLVPGAAILFGGEPGIGKSTLLLQVAGAVAAS 116

Query: 116 GARSVYISGEEAIDQVRLRALRLGLEKAPVDLAAATSVRDIVATLDSGEPPDVVVIDSIQ 175
           G   +Y+SGEE++ Q++ RA RLG+    +   A + V D+ + L+SG PP ++V+DS+Q
Sbjct: 117 GRDVLYLSGEESLTQLKGRAERLGVLHERLLAVATSRVEDVFSVLESGTPPALLVLDSVQ 176

Query: 176 TMYLDTLDSAPGTVAQVRAGSHELIRLAKRRGFVLFLVGHVTKEGQMAGPRVMEHMVDAV 235
           T+  D  +  PG V+QVRA + E++   KR G  + LVGHVTK+G +AGPR++EHMVD V
Sbjct: 177 TLTSDLAEGLPGNVSQVRAVATEVVDRCKRAGTAVLLVGHVTKDGNLAGPRLLEHMVDTV 236

Query: 236 IYFEGERGHPFRILRAVKNRFGATDEIGVFEMSDAGLSEVPNPSALFLAERRGNVTGSCV 295
           +  EG+R   FR+LR +KNRFG   E+ VF+M+  GL  V +PS  FL  R   ++G+ V
Sbjct: 237 VSLEGDRRQMFRLLRVLKNRFGPNQELLVFQMAQRGLEVVEDPSTFFLGARDPALSGTAV 296

Query: 296 FAGMEGTRPMLVEIQALVGPSAPGSARRAVVGWDGGRLAMVMAVLETRCGLALGGNDVYL 355
              ++G RP  VE+QALV  S     RR  +G+D  RL +++AVLE R  L  G  D+Y 
Sbjct: 297 VMAVDGQRPFAVEVQALVTRSYLAIPRRTGLGFDVNRLHLLLAVLEKRLRLNFGQVDIYA 356

Query: 356 NVAGGLRIGEPAADLAVAAALVSSFSGVPVPPDMVVFGEIGLSGEIRAVAHGDTRLKEAA 415
            + GG+R+ +P  DLA+ AA++SSF  V +P   V++GE+ L+G++R VA  D RL +AA
Sbjct: 357 KIGGGMRLQDPGMDLALVAAVLSSFYDVALPERAVLWGEVDLNGQVRPVAAHDIRLGQAA 416

Query: 416 KLGFDQALMPARPR 429
           +LG+   L P   R
Sbjct: 417 RLGYGPVLHPGEGR 430